Gene Hore_04170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04170 
Symbol 
ID7314092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp437298 
End bp440012 
Gene Length2715 bp 
Protein Length904 aa 
Translation table11 
GC content37% 
IMG OID643610840 
ProductCellobiose phosphorylase 
Protein accessionYP_002508170 
Protein GI220931262 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3459] Cellobiose phosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTGGG AATTCAACAA TAACAAGGGT ACCTTTAGTT TGAAGGGGGC TGATGATAAT 
AGTTATTTAT ATTTTCCACT GACTAACGAG AGTGGAATCA TGTCCTCAAT AACCCCGACA
CTAAACGGGG ACATTAAAAC TGACCAGAAT AGTTTTTTGA TGCAGCCTGT ATCTGTTGAG
GACCTACATA ATAACAGATC AAACCGTAAT TTCTGGTTAA AAATTGATGG TTATGGGCCG
TGGTCAGTAA CGGGTAATTC TGCCAGACAA ATTTCTATGA AATATACCGG AGATAAAAAA
ATAGAAACTG CTGATGTGGA AGCAGGGTTT TTATGGCATA AGGTGATAAG AAAAAATAGA
AAACTTAACA TTAAAGCAGA AATAACCAAT TTTGTCCCGG TAAATGAGGA CCAGGTTGAG
TTAATGAAAG TTACTATCGT TAATACGGGA CAGGAGACTA TAAAATTTAC CCCGACGGCA
GCCATTCCAG TATACGGACG TTCTGCTGAT AATCTGAGGG ATCATAGACA TGTTACCTCT
TTATTACATC GTATTACTAC TAATTCTAAC GGGGTTATAG TAACCCCTAC TTTGTCCTTT
GATGAAAGAG GGCATCAGCC AAATAATACT TCTTATGGTG TATTTGGGCG ATGTTCAGAC
TCTTCAGATC CGGTAGGTTT TTGTCCGGTT CTGGAGGACT TTATTGGAGA GGGAGGAACC
CTGGACTGGC CCCGTTCTAT TGTGGAAGGT AATGTTGATT TTGTAAAACC CGGTTTTAAA
TATGAGGGTT ATGAGAGTAT AGGGGCCATT AAGTTTGGTG ATAAAGAATT AAAAGCCGGG
GAGTCTATTT CCTATATTAT TGTAATGGTG ATAGATCATA ATGGGAAAGA CATGAAAAAA
TATATTGATA AATACTGTTC TGAAAAAGAT TTTGACAGGG AACTAAATGA AAATAAAAAA
TACTGGCAAT CTACAATTGA GCAGCTCACT TTTTATACAG GGGATGAAAC CTTTGATAAC
TGGATGAAGT GGGTTACCCT GCAGCCGGTA TTACGCAGGA TATATGGATG TTCATTTTTG
CCATATCATG ATTACGGCCG GGGAGGCAGA GGCTGGAGAG ACCTCTGGCA GGATTGTCTT
GCTTTATTAT TAATGGATGA TAAGAATGTC AGGTATCTAT TATACAATAA TTTTGCTGGT
GTTAGAATAG ATGGCAGTAA TGCGACAATA ATTGGTAATA AACCAGGTGA ATTTATTGCC
GACAGGAATA ATATTACCAG GTTATGGATA GACCATGGTG CCTGGCCCCT GCAGACGACA
AGTCTATATA TTAATATGTC CGGTGATATA AAATTCTTGA TGGAAAAACA GTCATATTTT
AAAGATAGAA TTGTATCCTT TGCCAGAGAG ATTGATAACA GGTGGCATCA GGGAATGGGT
AATAAATTAA AAACAGAAGA GGGCCAGGTC TACCACGGTT CCATTCTTGA ACATATTCTC
CTGCAAAATC TAACAGTGTT TTTTAATGTT GGGGAGCATA ATAACATAAG ACTGGAGGAT
GCTGACTGGA ATGACGGCCT GGACATGGCT TCAGAAAAGG GAGAAAGTGT CGCTTTTACA
GCCTTTTATG CCGGTAATTT GTTTGAGATT GTAAACCTGT TAGAAACATT AAGAGATAAA
GAAAATGTGA CTGAAGTGAA GTTGCTGGAG GAAATCAAGG TTTTACTGGA TACACTTTAT
AATCCGGTAG ATTATAATGA TGTCACTGCC AAAAATGAAG TGTTAAATAA ATATTTCGCC
AGTTGTAAAT ATAATATATC CGGTAACCAG GTTACAATAA AAATTGATCA ACTCATCAAA
GATATCAAAC GAAAAGCAAA CTGGTTACAG GAACATTTAA GGGAAAATGA ATATATTGGG
GATAATAAGG GGCATAAGTG GTTTAATGGA TATTATGATA ATAAAGGTCA GCGGGTTGAA
GGCAGGTTTG AAAAGGAAAC CAGGATGACC TTGACCGGAC AGGTATTTAC CACTATGTTT
GGTATAGCAA CCGGAGAACA GGTAAAAAAT ATAATTTCTG CTGCTGATTA TTACCTCTAT
GATGATGGTG TAGGAGGTTA CCGGTTAAAT ACAGATTTTA AGGACAAAGA TATTCAGCTT
GGACGTTGTT TTGGTTTTGC CTATGGCCAT AAAGAAAATG GAGCCATGTT TAGCCATATG
TCTGTAATGT ATGCAAACGC TCTTTACCGG AGAAATTTTG TTAAAGAAGG ATTCAAGGTG
TGGCATAGTA TTTATAATCA TTGCCTTGAT TTTGACAGAA GCCGTATTTA TCCCGGTATA
CCGGAATACA TCAGCCAACG GGGCAGGGGT ATGTATAGTT ATTTAACGGG TTCTGCCAGC
TGGTTATTAC TTACCTTTGC TACGGAAGTC TTTGGTGTTA AAGGGTATTA CGGGGATTTG
AGGCTGGAAC CAAAGCTATT AAAGGAGCAA TTTGATGAAG AAGGAAAGGC TACCATTGGT
ATTAAATTTG CCGGGAAGAG ATTAACAATA ACTTATGTTA ATCCTCAACT GTTAGACTAT
GATTCCTATA AGATAGATAA AGTAATGGTT AATGATGAAA TAATAGATTA TTATGAAGAT
AAACAGGTAA CTATTAAAAG GGAAGATATT GAAGAAAGGG ATGAAGTAAT AGATATTACG
GTAAGACTGG CATAA
 
Protein sequence
MGWEFNNNKG TFSLKGADDN SYLYFPLTNE SGIMSSITPT LNGDIKTDQN SFLMQPVSVE 
DLHNNRSNRN FWLKIDGYGP WSVTGNSARQ ISMKYTGDKK IETADVEAGF LWHKVIRKNR
KLNIKAEITN FVPVNEDQVE LMKVTIVNTG QETIKFTPTA AIPVYGRSAD NLRDHRHVTS
LLHRITTNSN GVIVTPTLSF DERGHQPNNT SYGVFGRCSD SSDPVGFCPV LEDFIGEGGT
LDWPRSIVEG NVDFVKPGFK YEGYESIGAI KFGDKELKAG ESISYIIVMV IDHNGKDMKK
YIDKYCSEKD FDRELNENKK YWQSTIEQLT FYTGDETFDN WMKWVTLQPV LRRIYGCSFL
PYHDYGRGGR GWRDLWQDCL ALLLMDDKNV RYLLYNNFAG VRIDGSNATI IGNKPGEFIA
DRNNITRLWI DHGAWPLQTT SLYINMSGDI KFLMEKQSYF KDRIVSFARE IDNRWHQGMG
NKLKTEEGQV YHGSILEHIL LQNLTVFFNV GEHNNIRLED ADWNDGLDMA SEKGESVAFT
AFYAGNLFEI VNLLETLRDK ENVTEVKLLE EIKVLLDTLY NPVDYNDVTA KNEVLNKYFA
SCKYNISGNQ VTIKIDQLIK DIKRKANWLQ EHLRENEYIG DNKGHKWFNG YYDNKGQRVE
GRFEKETRMT LTGQVFTTMF GIATGEQVKN IISAADYYLY DDGVGGYRLN TDFKDKDIQL
GRCFGFAYGH KENGAMFSHM SVMYANALYR RNFVKEGFKV WHSIYNHCLD FDRSRIYPGI
PEYISQRGRG MYSYLTGSAS WLLLTFATEV FGVKGYYGDL RLEPKLLKEQ FDEEGKATIG
IKFAGKRLTI TYVNPQLLDY DSYKIDKVMV NDEIIDYYED KQVTIKREDI EERDEVIDIT
VRLA