Gene Hore_04130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04130 
Symbol 
ID7314088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp425261 
End bp427855 
Gene Length2595 bp 
Protein Length864 aa 
Translation table11 
GC content38% 
IMG OID643610836 
Producthypothetical protein 
Protein accessionYP_002508166 
Protein GI220931258 
COG category[L] Replication, recombination and repair 
COG ID[COG3857] ATP-dependent nuclease, subunit B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTA CTTATCTAGA CTATCACGAG GATCTTTTTA GTAAAATAAT CAGTAATGAC 
CTTCCCAGAA TCTATGTTTT TGATAACACT AATAACATGC TCAAGGCCAG GGAATATTAC
AAAAAACCAT TATTACAACG GGGAAGTATT TTTATTACTA TATCAGACCT GAAAGAAAAA
CTATTCCCGA CTGACCGCCT CATTTTAAAG GAAGAAAAGT TAGCAGTAAT ATTCTATGAA
TTACTGACAG AAAGAGAGAA GAAGGAACTC CAGATAAGTG ACTATTTTGA TGCCATTGAA
TTTGCCAGTG AATTTTTTAA TTTTTTCAAT GAATTAAATG AATATGGTGT TAAAAATATT
GATAATTTAA GGAAATGGCA GGAGAAGAAG TATAATCTTT TTAAAACAAT CAGAAAAAGG
TACCGAAAGC GTCTAGAGGA ACTCAATTAT ACGGATCGGA CCCTGGCTTT TAATTTTAAT
AACTTCTGTT CTCATTTTAT GGAGGGATAT AATGAACTTG TTTTTGTTAA TATTGTTAAC
TTTACCCCGA AAGAAAAAAG GTTGTTAAAG TTGCTTCAGG AAACAGGAAA AGAAATTAAT
CTGGTGTTAC AGCTTTCCCC CGATGACTTT GATGAAGAGT CCCTGAGATT AAAATCGGTA
ACCCTTCCTG AAGAGTTAAG TTCTGAGATT GAGTTGTATT ATACAGGGGA ACGTTTGACC
CAGATGGTTA ATCTGATTTC AAAAATGGAG GCAGAAAACG GAAATATAAC CATTCTGGAT
GCTGATTATA ATAACACATG CTACCATCGT CTCATATCAC CTGATAAAAT AGACATTGAC
CGGGATTTAA GTTTTACGGA AACGAAAATA TACAGGTTTT TAGAGGTTAT ATATAACCTT
CTCAAAAATG CCGATTCCAC CGATGGTTTT TTAAGGGTTG AGCTTAATGA TCTGTTGGAG
GCATGTTATC TCCAGGAATT CAGGGATTAC TTCAGTATTA ATGAAAATGC CGTAAAAGTC
CTGCAGGAAC TGGCCCGGGA GGAATATGCC TACTTTTATC CTGGCTTTAT AAAAAGGTAT
ATATCACTGA AGAGATTTGG AGAGGTCCTC GAAGAGATAG AAAAATTAAG ACAGATAGAA
AACATAAATC AGTTATGTAA TTACCTGGAA AACCTCAATC TGTATTTTCT CAATGACAGG
GAGATCAGTA ATAATATAAC CCAGTATTTT GACGCCCTGC TAGAGTTGAA TTCTCTTGAA
GAGATGGGGA TTGTTAGTTC CTGGGACCAT TATTTTAAAG ATAAGGCCCG TGGCCTTTTC
CGCATGGCTT TAAATTACCT GCGATATAAA AAGGTAAAAC CGGTTATTGA CAACCAGAAT
AAAGGTAATA AACTTGATAG TCTGTTTTCT GCTCCCCACC TTTCCCGGGA TATACTGATA
GTCCTCAATG CTTCCCGGGG GGTTATTCCT TCAGAGGCAG GGAATGATTT TATATTGACC
GACAGGCAGA GGGCGGAACT GGGTTTAGAG ACAATAAATA ATTTAAGATT GAGGGAGAAG
TATTATTTTT ACCGCCATAT TTTAAACAGC CAGAAAACCA TTATCTTCAG CCTGAAAAAT
CTGGAGAGCA ACCTGACGAC CAGCTCTTTT GTTGATGAAC TCAGGTTAAA ATACGGACTT
GACCTTAAAG AAGCGGAGAT TACTTCCCGG CAGCTACCGG CTGTTATCCG GAGGATATTT
CCTGCAAAGC CAGCTGCACT GGGGATGGTA TCTTCTGTTA GCAGAAAAGA AGATAAACTG
GTTATAGAAA CCGATGATTT CCCGGGAAAT CAAATGTCTC TGTCTTATTA CAGGTATACA
ACTTTGATAG ACTGTTATTA TAAATTTTAC CTGGAAAAGT TAGTCCGGCT TGCTGAAGAC
AGGGTGGTAG TTGACCGGGA GATGAGTCCC CTCCTCTTTG GTAATTTTGT CCATGAAGTC
TTTGCTGAAG TTTTAAACCG TCAGGGACGT AATTTAAATG TATCTAAAGA AGTGGTGGAA
GAGGTTATAG TCGATAAACT TAATTCCTAC AGGCTTCAGA TTAATAACTA TTACCTGCCA
TATTACCGGA AAGTTTTACT CCCTACAGTT CGTGATTCGG TTATCAGTTT CTTCAGGGGA
TTAAAAAGAA GGGTTAAAGG AGAGATTGTC GATATTAAAA TTGAATGGCA GCCTGAAAAG
AGTAAAGACC GGGTCATTTT TAACCACGAT TTTACCGATG TATTCTTAAA TGGCCGGGTT
GATCTTATCA TCGAAACCAG TGATACCCGG TTTATTATAG ATTTTAAAAC AGGCCAGGGC
AAGGAAGACC AGCTTGATTT CTATTCCCTG TTGCTTGCCC CTGATTATGG AAGCGAAAAA
AAGGTTGCTA AAGAGCTTTA TAATGTCATG AAAGCCAGTT TTAAGGCCGG CGCTCCCGGT
ACTGAGGAGG AGTTTGCCAG GGAAATAAGT GAGGAAATAA AGAACTTTTT TGAAGGTGGG
GAATATACGA CTATTTATAA ATCTCGCTGT AAAGATTGTA ACTGGATGGA TATCTGCAGG
GTGGTGATAG AATGA
 
Protein sequence
MNFTYLDYHE DLFSKIISND LPRIYVFDNT NNMLKAREYY KKPLLQRGSI FITISDLKEK 
LFPTDRLILK EEKLAVIFYE LLTEREKKEL QISDYFDAIE FASEFFNFFN ELNEYGVKNI
DNLRKWQEKK YNLFKTIRKR YRKRLEELNY TDRTLAFNFN NFCSHFMEGY NELVFVNIVN
FTPKEKRLLK LLQETGKEIN LVLQLSPDDF DEESLRLKSV TLPEELSSEI ELYYTGERLT
QMVNLISKME AENGNITILD ADYNNTCYHR LISPDKIDID RDLSFTETKI YRFLEVIYNL
LKNADSTDGF LRVELNDLLE ACYLQEFRDY FSINENAVKV LQELAREEYA YFYPGFIKRY
ISLKRFGEVL EEIEKLRQIE NINQLCNYLE NLNLYFLNDR EISNNITQYF DALLELNSLE
EMGIVSSWDH YFKDKARGLF RMALNYLRYK KVKPVIDNQN KGNKLDSLFS APHLSRDILI
VLNASRGVIP SEAGNDFILT DRQRAELGLE TINNLRLREK YYFYRHILNS QKTIIFSLKN
LESNLTTSSF VDELRLKYGL DLKEAEITSR QLPAVIRRIF PAKPAALGMV SSVSRKEDKL
VIETDDFPGN QMSLSYYRYT TLIDCYYKFY LEKLVRLAED RVVVDREMSP LLFGNFVHEV
FAEVLNRQGR NLNVSKEVVE EVIVDKLNSY RLQINNYYLP YYRKVLLPTV RDSVISFFRG
LKRRVKGEIV DIKIEWQPEK SKDRVIFNHD FTDVFLNGRV DLIIETSDTR FIIDFKTGQG
KEDQLDFYSL LLAPDYGSEK KVAKELYNVM KASFKAGAPG TEEEFAREIS EEIKNFFEGG
EYTTIYKSRC KDCNWMDICR VVIE