| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_03980 |
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| Symbol | |
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| ID | 7314073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 407810 |
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| End bp | 408982 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643610822 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_002508152 |
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| Protein GI | 220931244 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00000793446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCATC AGAAACTTAA AGACCTTTTA CCCCTGTATG TGGATAACGG GTTGAATGAT
GAGGAGAAAA ACCTGGTGGA AAAACATTTA AAAGAATGTG AGGAGTGCCG CAATGAATTG
AAACATTACC GGCAAAATTT TAATATACTT TCCTCAACTG AGGGGGTTGA GCCCCCACAG
GATATAGTTG AGTCTGTCAT GGAGGGACTT AATAACCTGG ATTATAATAT AGATAAAGAA
CAGGAGCAGA ATACCTGGTC TGATAAACTC CTTAATCTCT TTAGACTAAA GGTAAGGATA
CCAGTTGGGG CAGTTGCTGT GGTAGTAGCA ATTATCCTGA GTATAGCTTT ATTTTCACCC
GGCATATATA ATTCCTATCA GAATTACAGT CTCTCCCGGG AAGAAATGGA GATGGGACAG
GAAGCAGCCC CGGAACAGGA TCTTAAGATG GCCCGTGACC GAACCATGAA CAGGACAAAC
CTCAATCAAT CTTCACCCAA TACTAATCAG GAAGCAGGAC TGGATCGGAA GATTATTCAA
AATGCCAGTC TGGAGATTGA GACCGATGAT TTTGCAGAGG TCAGCAAGGT GGTTACCGGA
CTGGTTACCA GCTATGAGGG CTATATTGCT AGTTCTACAA ACTGGGTTAC TGCTTCTGGA
CAGAAAAAGG TCAGTTTTAC TTTAAGAATT CCAGAAAATC ATTTCCACAT GGTACTGGAA
CAGATTAAGA ATATGGGGAG AGTTAAGTAT AGTAGCCTGG GGAGCCGGGA TGTCACCGAG
GAGTTTATCG ATGTTGAAGC CAGGCTTGAC AACCTGAAAG AACAGGAGAT AAGATACCGT
AAACTCCTTG ACAGAGCCGA TAAAGTAGAG GATATTCTTA AAATTGAACG GGAACTGGAA
AGGGTCCGCA GTACTATAGA GAGTCTGGAA GGGCGAATTG AGTATCTACA AAACCGGGTT
TCATTTTCAA CCATAAATGT TGTCTTCATG GAACCGGAAT CAATTATGAA TAGTAACCGG
GGGATAATTG GTGCATTACG CCAGGCCCTG AGGGCGATGG TTGAAAGTTT TTACAACCTG
ATTATCAAAT TAGGTGCCTG GTTACCATAT ATGCTTCCCC TGGTGGCAGG ATATTTTATA
TACCGGAGAC ATAAATTAAA GAATAAAGAG TAG
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| Protein sequence | MNHQKLKDLL PLYVDNGLND EEKNLVEKHL KECEECRNEL KHYRQNFNIL SSTEGVEPPQ
DIVESVMEGL NNLDYNIDKE QEQNTWSDKL LNLFRLKVRI PVGAVAVVVA IILSIALFSP
GIYNSYQNYS LSREEMEMGQ EAAPEQDLKM ARDRTMNRTN LNQSSPNTNQ EAGLDRKIIQ
NASLEIETDD FAEVSKVVTG LVTSYEGYIA SSTNWVTASG QKKVSFTLRI PENHFHMVLE
QIKNMGRVKY SSLGSRDVTE EFIDVEARLD NLKEQEIRYR KLLDRADKVE DILKIERELE
RVRSTIESLE GRIEYLQNRV SFSTINVVFM EPESIMNSNR GIIGALRQAL RAMVESFYNL
IIKLGAWLPY MLPLVAGYFI YRRHKLKNKE
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