Gene Hore_02790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_02790 
Symbol 
ID7314665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp281107 
End bp281883 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content36% 
IMG OID643610702 
ProductABC transporter related 
Protein accessionYP_002508035 
Protein GI220931127 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACAA AACCGGTTAT TTCTATTAAA AATTTAAGGA AGAGTTTTGG TTCCAATGAG 
GTTTTAAAGG GGGTTAATCT TGAGGTATAC CCCGGTCAAG TTATAGGGTA TATTGGACCG
AACGGAGCCG GTAAGAGTAC AACGGTTAAA ATTATGCTGG GAATTATAGA AGAATATGAA
GGGCAGATTG AAATATTTGG AGAGGATATT ACAGGTCAAA CTGATTATAA AAAAAGAATC
GGTTATGTCC CAGAAGATGG GGAAATATAT GAAAGCTTAA CAGGTTATGA ATATCTTACC
TTTTTAGGAA AGATATATGG ACTGGATTTT GAATCAGCCA ATAAAAAAGC AGAAAGGTTG
TCACAACTAT TTGGGATAGA AGAAAGTTAC CACTCTCCAA TTTCTTCTTA TTCAAAGGGA
ATGAAGCAGA AACTATTAAT TATAGCCAGT CTTCTCCATA ACCCTGACAT TTTGTTTTTG
GACGAACCTT TAAGCGGACT GGATGCCAAT AGTGTTATGG TTTTAAAAGA ATTACTGGCA
AGACTGGCCA GGCAGGGAAA GACTATTTTT TATTGCTCCC ATATTATGGA GGTTGTCGAA
AAGATAAGCA ACCGGATATT ATTAATTAAT AAGGGACAGA TAGTGGCCGA TGGTAGTTTT
GAAGAATTAA AAGCTAAAAG TAAACAGGGC TCATTAGAAG GAATATTTAA TCAGCTGACA
GGGTTTAGCG AACATCAGAA AATAGCTGAT GAGATAATTT CAACATTAGG GGAGTGA
 
Protein sequence
MVTKPVISIK NLRKSFGSNE VLKGVNLEVY PGQVIGYIGP NGAGKSTTVK IMLGIIEEYE 
GQIEIFGEDI TGQTDYKKRI GYVPEDGEIY ESLTGYEYLT FLGKIYGLDF ESANKKAERL
SQLFGIEESY HSPISSYSKG MKQKLLIIAS LLHNPDILFL DEPLSGLDAN SVMVLKELLA
RLARQGKTIF YCSHIMEVVE KISNRILLIN KGQIVADGSF EELKAKSKQG SLEGIFNQLT
GFSEHQKIAD EIISTLGE