Gene Hore_02460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_02460 
SymbolrplM 
ID7312566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp253193 
End bp253621 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content41% 
IMG OID643610669 
Product50S ribosomal protein L13 
Protein accessionYP_002508002 
Protein GI220931094 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000118525 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCACCT ATATGGCCAA ACCTCATGAA GTAGAACGCC AGTGGTATGT TGTTGATGCC 
ACTGATAAAG TGTTGGGTCG TTTAGCCACA AAGATTGCAG AAATATTGAG GGGTAAACAT
AAACCAACCT TTACACCACA TGTTGATACC GGTGATTATG TTATTGTTGT AAATGCAGAC
AAGGTAAAAT TAACCGGTCG GAAATGGGAA CAGAAAAAGT ATTACCGCCA TAGTGGGTAT
CCCGGTGGTT TGAAGGAAAT GAGCTATGAA AAATTACTTC AAACTAAGCC GGAATTGATT
ATTGAAAAGG CTGTCAGGGG AATGTTACCC CATAATAGAC TGGGAAGAAA GATGATTAAG
AAGTTAAAGG TTTATGCAGG TCCGGACCAT CCACATGAGG CCCAGAAACC TGAAAAACTA
GAACTCTAG
 
Protein sequence
MSTYMAKPHE VERQWYVVDA TDKVLGRLAT KIAEILRGKH KPTFTPHVDT GDYVIVVNAD 
KVKLTGRKWE QKKYYRHSGY PGGLKEMSYE KLLQTKPELI IEKAVRGMLP HNRLGRKMIK
KLKVYAGPDH PHEAQKPEKL EL