Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_01780 |
Symbol | |
ID | 7313306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 183947 |
End bp | 185122 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643610601 |
Product | Serine/threonine specific protein phosphatase |
Protein accession | YP_002507935 |
Protein GI | 220931027 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGTTG AAAAGGGAAT TCGCCAGCTT AAAAAGTTTA ATGAAGAGCT CTGTGGTGAT AAGGTAGAAG TTTATCACGA TGACCGGCGG TTTCTGATGG CCCTGTCAGA TGGCCTGGGG AGTGGAGTTA AAGCCAATAT TCTGGCTACC CTGACCAGTA AAATAATTAT AACCATGGTT AAGGAGGGAA TGGGTTTATC AGATGTAATT GATACAATCG GTAAAACCCT TCCCATCTGC CAGGTAAGGA ATATAAGTTA TGCGACTTTT ACTATTGTAG AAATAGATAA AATAAATTCC ATAGCAACCC TTATTGAATT TGATAACCCC GGAGCCCTGA TTTTCAGGGA TAACAGGTTA ATAGAGATTG AAGGTGTAAA AGAAGAGTTC AAAAATCATA AGGTTAAAAA GAGTATCTTT AAACTACAAT ATGGTGATAT CCTTGTTCTT TTCAGTGACG GCGTAATTCA TGCCGGGATT GGAGCCAAAC TTAAACTTGG ATGGCCCCGT AAAGAGGTAG CCAGATATAT TCATAAGATT ATAAGAAGGC GGGAGGGGAT AAGTATGGAA GAACTGGCGG ACTGGCTGGC AGAAGCCTGT AATAATTTTT ATGATAACAA ACCAGGAGAT GACACTACCA TTGCTGCTAT AAGAGTCAGA CCTTCTCAGA GTGTAACCAT CCTGGTTGGG CCGCCAAAAG ACAGAAGTAA GGACAAAGAA GTAACCGAGC TGTTAATGAA AGAAGAAGGT AAGAAGATTG TCTGTGGGGG AACCACCAGC AAACTGGTGG CCCGGGAACT GGGTAAAAAT ATTAAGGTTG AATTAGACGA AAAAAGTAAA AATATGTCTA AAGTGGGTCA AATTCCACCC GGTGGGACAA TAGAGGGCAT AGACCTGGTT ACTGAAGGAG TGTTAACTCT CCAGAGGGTC TATAGCGTCC TGTCAGGTGA GGAAAAATTA CCAAAAGGTA ATTATGGTAT TAATAAAACT CTCTATACTT TTGTTGAAAC TTTGCGGGAA TCAGATGTAA TTACTTTTCT GGTGGGCAGA GCTATAAATC CTGCTTACCA GAATCCGGAC TTACCACTGG CAACAGGTGT AAAAGAACAT CTAATAAATA AAATTGCCTC TATTCTGCAG AGGCAGGGGA AAAGGGTTAA TATCAAATAT TTTTAG
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Protein sequence | MMVEKGIRQL KKFNEELCGD KVEVYHDDRR FLMALSDGLG SGVKANILAT LTSKIIITMV KEGMGLSDVI DTIGKTLPIC QVRNISYATF TIVEIDKINS IATLIEFDNP GALIFRDNRL IEIEGVKEEF KNHKVKKSIF KLQYGDILVL FSDGVIHAGI GAKLKLGWPR KEVARYIHKI IRRREGISME ELADWLAEAC NNFYDNKPGD DTTIAAIRVR PSQSVTILVG PPKDRSKDKE VTELLMKEEG KKIVCGGTTS KLVARELGKN IKVELDEKSK NMSKVGQIPP GGTIEGIDLV TEGVLTLQRV YSVLSGEEKL PKGNYGINKT LYTFVETLRE SDVITFLVGR AINPAYQNPD LPLATGVKEH LINKIASILQ RQGKRVNIKY F
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