| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_00880 |
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| Symbol | |
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| ID | 7314310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 106731 |
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| End bp | 108086 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643610510 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_002507844 |
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| Protein GI | 220930936 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000000121912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAGAC CTAAAACCTA TTATATCTGC AGTGAATGTG GTTATAAATC TGCTAAATGG
ATGGGACGTT GTCTAAACTG TGGTGCCTGG AATACTTTTC AGGAACTGGA TGAAGAAGCC
ATTGAGGAAA AGGTGGATAT CAAGGTTACC CCTAGTTCAA TAACTGATAT AAAAGCCGGG
GCCTGTCCCC GGCTTTCTTC CGGTATTGGG GAGTTTGACA GGGTGCTTGG TGGAGGTGTT
GTGCCCGGTT CTTTAATTCT ACTTGGAGGT GCCCCTGGAA TAGGTAAATC GACCCTGGTT
CTTCAAATGG CCAGGCACTT CAGCGAAAAA TATGGAAAAG TTTTATATGT CAGTGGTGAA
GAATCAGCTT CCCAGTTAAA AATGAGGGCC GGGAGGCTCG GGGCTATAAA TGAGGATTTA
TATGTTCTTT CTGAAACTAA TTTTCAACAA ATTTATGGTG TTATACAAAA TGAAAAATAT
GAATTAATAA TAATAGATTC TATACAAACA ATATTTGACC CCCGGATTGA ATCTACCCCC
GGTAGTATAA GCCAGGTTAA GGAAGTTACT AATAGGTTAC TTATTCAGGC CAAGAAACTG
GAAGTTCCCA TCGTTTTAAT AGGACATGTT ACCAAGGAAG GACATCTGGC CGGTCCCCGG
GTCCTGGAAC ATTTGGTTGA TACAGTTCTT CAGTTTGAAG GGGACAGGAA TTACATCTAT
CGAATTCTCA GGGCAGTAAA AAATCGTTTT GGCTCTACAA ATGAGATAGG TGTCTTTGAA
ATGATGGGAA GTGGTATGAG AGAAGTGGTT AATCCCTCGG AAATTTTCCT TAAAGGGAGG
GCCCAGGGGG TATCGGGTTC TGTGATAGTT CCGGTTGTCG AGGGGAGTAG ACCCCTTCTT
GTTGAGGTTC AGGCCCTGGT AACCTACTCG AGTTTTGGGA CCCCCCAGCG GTTAACAACC
GGTGTTGACC GGAAGAGGGT TTCTATTTTA CTGGCTGTCC TGGAGAAAAA GGCTGGTATT
AATTTTCATA ATCAGGATGT TAATATTAAT ATAACAGGGG GCTTAAAAGT AGAAGAGCCG
GCCCTGGATC TCGGTATAAT AACAGCTATT TTATCAAGTT GTAAAGACCA GGAGGTAGCT
CCGGACCTGG CTGTGATTGG AGAAGTAGGA CTGGCCGGGG AGATACGGGC TGTCAGTCAG
ATAGAGAGGC GTTTAAGTGA ATTAAAAAAG ATGGGCTTTA AGGAAGTTGT TATTCCTGGA
GGCAATATAT CTGGTCTGGA CTTTGACCCG GATATTAATA TAGTTGAAGT TAAAAATGTT
AATGATCTCA TGAAGATATT GTTTAACAGG AGGTGA
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| Protein sequence | MPRPKTYYIC SECGYKSAKW MGRCLNCGAW NTFQELDEEA IEEKVDIKVT PSSITDIKAG
ACPRLSSGIG EFDRVLGGGV VPGSLILLGG APGIGKSTLV LQMARHFSEK YGKVLYVSGE
ESASQLKMRA GRLGAINEDL YVLSETNFQQ IYGVIQNEKY ELIIIDSIQT IFDPRIESTP
GSISQVKEVT NRLLIQAKKL EVPIVLIGHV TKEGHLAGPR VLEHLVDTVL QFEGDRNYIY
RILRAVKNRF GSTNEIGVFE MMGSGMREVV NPSEIFLKGR AQGVSGSVIV PVVEGSRPLL
VEVQALVTYS SFGTPQRLTT GVDRKRVSIL LAVLEKKAGI NFHNQDVNIN ITGGLKVEEP
ALDLGIITAI LSSCKDQEVA PDLAVIGEVG LAGEIRAVSQ IERRLSELKK MGFKEVVIPG
GNISGLDFDP DINIVEVKNV NDLMKILFNR R
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