Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_00790 |
Symbol | |
ID | 7314297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 91772 |
End bp | 92560 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643610497 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002507835 |
Protein GI | 220930927 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.772214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTCC GCAATTCTTT TTTTCACGAA ATATTAATCA GACCCTGGGA AGGGACAAAG TTTGTAGCTT TCAGTAACTA TTTCAAATTA TTATCTTCGG GGGATTTCTG GTCATCTTTT TCCCGGACCA TTGGCTGGAC AGTATCTTCG GTAATTGGTA AAACCGTGAT TGGTTTGATT ATTGCCCTAT TATTGAATAA AAAATTCAGG GGACGTGGCA TTTACCGGAC TCTGATACTG GTTCCCTGGG TAACACCACA GGTTATCGGG GCAATAGTCT GGAAGTGGAT TTATAATGGT GAATACGGTA TGCTAAATTA TGTTCTTATT AAACTGGGGT TTTTAGAGCA GGGTCATTCC TGGCTGGGAA ATCCGGATAC AGCTTTTCTA TCATGTTTAA TAGATGATAT CTGGGTAGGT ATTCCCTTTA TGTCCATTGT TTTTTTAGCA GGCTTACAGG CTATTCCCCA GGAAATGTAT GAAGCAGCCC AGGTGGATGG AGCCGGTAAG TTAAAGCAGT TGTTTTTTAT TACCTTACCC CAGTTGAAAC CGGTCTTTTT AACGGCAACA ATTCTATCAA CAATCTGGAC TTTTAATTCC TTTAATATAA TCTGGACCCT GACCCGGGGG GGACCGGTAA ATGCTACTGA AATACTTGTT GTTAAAACCT ATAAAACAGC TTTTCAAAAG TTTAACATTG GACTGGGTTC TACCTATGCC GTTATTATCT TTATTATTCT TATGATTTTC AGTATAACTT ACTGGAGGAG GTTTAATGAT GAACTCTAG
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Protein sequence | MSFRNSFFHE ILIRPWEGTK FVAFSNYFKL LSSGDFWSSF SRTIGWTVSS VIGKTVIGLI IALLLNKKFR GRGIYRTLIL VPWVTPQVIG AIVWKWIYNG EYGMLNYVLI KLGFLEQGHS WLGNPDTAFL SCLIDDIWVG IPFMSIVFLA GLQAIPQEMY EAAQVDGAGK LKQLFFITLP QLKPVFLTAT ILSTIWTFNS FNIIWTLTRG GPVNATEILV VKTYKTAFQK FNIGLGSTYA VIIFIILMIF SITYWRRFND EL
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