Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_00550 |
Symbol | |
ID | 7314273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 61533 |
End bp | 63905 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643610473 |
Product | Serine/threonine specific protein phosphatase spoIIE |
Protein accession | YP_002507811 |
Protein GI | 220930903 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | [TIGR02865] stage II sporulation protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00773403 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTGGAC AAGTTGAATC AGTAAAAAAT TATAGTTTTT TGAAAGATAA TATTAAAACC AAAAGTAAAT TATCATATTT TTTTTATTAC CTGATAATCG GGGTTTTAGG TTTTATCCTC GGCAGGGCAG AGGTGTTTAG TGGATATTAC CCTTTTTCCC TGATATACTG GATGGGTTTT GCCCTGGAAA GCCCACTGGT AATGATTTAC ATCACTGTAG TAAGTGGAGC AGGGCTGGCC TGGAATGGAG ATTATTTGAA TCTTATTTAT CTGCTGGCTG GATTTTCAGG GGTTATCCTC AGTAGTTTTT TTAAAAAAGG GAAAGATTCT ATTTTCTTTC CGGTAGCTAC GGGATTATGC TATCTTGCCC TGTCCATTGT CAGAGGGATA ATTTATCAAA AACCCCTTTA CTGGTTTGTA ATAACAGGTA TTGAAGCCCT TGGTATTATA CTAGTTTTTT TATTATTAAA GGGTACCAGA ATACATATTT TTGATAAGCA GGGGTTTGTA AAGGCTTCAC CAGTGGTGTT ATTGATAACC AGTCTGGGAT TTCTGGTGGG GATTGCCAAT ATTGATTTTG TTCCCTTTTT TGTCTTACAT ACATTTATCT ATTTGTTTGT CAGTGGTGTT GCCTATATTT CCGGGTTTAG TTATGCAGTT ACTGTTTCGG TGTTGTATGG TTTAATATTG AGTGGGCTGG GTCTGATACC ATTTGTAGTT ATGTTGAGAA TTTTAATTAT CGGCGTTATA ACAGGGCTTT TTAAAAGAAA ACCTAAATAT ATGTTTATAG TAGGTTATTT TTTAACCTTT TTAGTATATT CTGGTTTTTC ACCAGGATTA TATGATTTAA AAGAGGCTGG TTATGGGTTT GGGATTGCGC TGGCCCTTTA TCTGGTGATA TCTGAATCCC TGTGGGTACA ACTACTGTCG GGTTTAAAAC CCAGTCCTTC CCGGGTTAAA AAGTTGAAAA CAGATAATGA GTTAAATAAA ATTTTTAAAC AACACCTGCT GGAATTGAGC CGGGTTTTTA AAGAATTAAG TGTTACGTTT AAAGAGGTTT TACCTGATGA GGAAGAAGAA GAGAACCTGG AAGACCTGGC GTTTATTTTA AAAAATAAAG TCTGTCAGAG ATGCCCCCGA CTTAAAATAT GCTGGAAAAA GGAACGGGCA GACACCTATA TGAAACTCAG CAGGTTAGTT GAAAAGGCCA GGAAAGCCGG TAAAATAGAA AAACCAATGT TTAATAACCT ATTTAAAGAT AAATGTCCTT TTATCAACAA AATTATCGGT GGGGTTAAAA GTAGTTATGA AATATACCAG GTAAATAAAT TCTGGCGGGA AAGACTGGAT GATAAACAGC GTATTGTTTC TGAACAACTG GCGGGACTGA GCGAAATAAT TCAGCAATTT TCCCAGTCTT CAGGTATTGT ACTAAGGGAT AACCCGACAC TTTCCCACAT ATATGAAAGG GCTGTTAACC GGGGAATTGA TGTTTATAAT CTGGAGGTTG ATACTAATAT TTATTCATCC CGTCTTAATA TTGTAGCAGA AATGGAACCC TGTAGTGATA CCAGACCCTG TGAAGAACAG CTTTTACCCC TTATTAGCTC TGAATACCAA TATAATTTCA GGGTAATAAA TAAAAAGTGT GGTAATAAAC TTAAAGATAT TCCCTGTAAA TTATTATACG CCCCCCGGGG TAGCTATAGC CTTGAATATG CTGTTTTACA GAAGGCAAGT ACCGGGAAAA TATCAGGGGA TACATATCTT TTTAGACCTT TGAGGGATGG TAAGGATTTA ATTGTCTTAA GTGATGGGAT GGGAGTTGGG AAAAAGGCCT ATCAGGAAAG TAAAGCTGCT GTGAATCTCC TTGAAAAGAT TATTGAAGCC GGTTTTGACC GGGATCTGGC GATACGGACA ATTAACTCAG CCCTGTATTT CAGAAGCCAG GAAGAAAGTT TTACAACTCT GGATATCGGC TTTTTTGATA CTTTTACCGG GGAACTTATC TTCAATAAAA TCGGGGCAGT ATCAAGCTTT GTGAAACGGG GTTTTGAGGT TTTGCAGATA AAGGCTTCTT CCTTACCGGT TGGAATTTTA GAGAAGGTTG AAATTTCTAC TCATTCTGTA AACCTAAAGG AAAATGATTT TGTTATTATG GTGACCGATG GGGTCCTGGA TTCGAGTCCT GACATTCAGG ACAAAGAAGG TTGGTTTATG AGAATACTTC AGAATTGTTC TTTTGATAAC CCCAGAGAAC TGGCATCATA TCTTATGGAG GTTGTTACCG GGGCCCAGGG CGGAGTTGAT GATGATTTAA CTATTATTGT ATTTAAGGTC AACAAATTTT TAGAAAAAAA GCAGGAAATT TAA
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Protein sequence | MFGQVESVKN YSFLKDNIKT KSKLSYFFYY LIIGVLGFIL GRAEVFSGYY PFSLIYWMGF ALESPLVMIY ITVVSGAGLA WNGDYLNLIY LLAGFSGVIL SSFFKKGKDS IFFPVATGLC YLALSIVRGI IYQKPLYWFV ITGIEALGII LVFLLLKGTR IHIFDKQGFV KASPVVLLIT SLGFLVGIAN IDFVPFFVLH TFIYLFVSGV AYISGFSYAV TVSVLYGLIL SGLGLIPFVV MLRILIIGVI TGLFKRKPKY MFIVGYFLTF LVYSGFSPGL YDLKEAGYGF GIALALYLVI SESLWVQLLS GLKPSPSRVK KLKTDNELNK IFKQHLLELS RVFKELSVTF KEVLPDEEEE ENLEDLAFIL KNKVCQRCPR LKICWKKERA DTYMKLSRLV EKARKAGKIE KPMFNNLFKD KCPFINKIIG GVKSSYEIYQ VNKFWRERLD DKQRIVSEQL AGLSEIIQQF SQSSGIVLRD NPTLSHIYER AVNRGIDVYN LEVDTNIYSS RLNIVAEMEP CSDTRPCEEQ LLPLISSEYQ YNFRVINKKC GNKLKDIPCK LLYAPRGSYS LEYAVLQKAS TGKISGDTYL FRPLRDGKDL IVLSDGMGVG KKAYQESKAA VNLLEKIIEA GFDRDLAIRT INSALYFRSQ EESFTTLDIG FFDTFTGELI FNKIGAVSSF VKRGFEVLQI KASSLPVGIL EKVEISTHSV NLKENDFVIM VTDGVLDSSP DIQDKEGWFM RILQNCSFDN PRELASYLME VVTGAQGGVD DDLTIIVFKV NKFLEKKQEI
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