Gene Hore_00520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_00520 
Symbol 
ID7314269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp59206 
End bp59580 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content37% 
IMG OID643610469 
ProductRNA binding S1 domain protein 
Protein accessionYP_002507808 
Protein GI220930900 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1098] Predicted RNA binding protein (contains ribosomal protein S1 domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.85433e-19 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCG ATGTTGGTAG TACTGTTGAA GGCAAAGTTA CCGGAATTAC AAAATTTGGA 
GCATTCGTCG AATTGCCAGG GGGGGATACT GGTTTAATTC ACATTTCAGA GATTGCAAAT
ACTTATGTTA AAGATGTTGG TAACTACCTG AAAAAGAATG ATACGGTTAA AGTAAAGGTA
ATTAATATTG ACAAAGACGG TAAAATTGGA CTATCAATAA AACGTCTGGA TAACCCTTCG
GACAGGGTAG ATAGTGCTCC TAATATGTCT TTCGAAGAAA AAATGGCTAA ATTCCTGAAA
GAAAGTAATG AAAAATTACA GGATTTAAAA AACCAGAAAG CCAAACGTGG GGGCCGCTAT
AAGAAGACCA GATAA
 
Protein sequence
MSIDVGSTVE GKVTGITKFG AFVELPGGDT GLIHISEIAN TYVKDVGNYL KKNDTVKVKV 
INIDKDGKIG LSIKRLDNPS DRVDSAPNMS FEEKMAKFLK ESNEKLQDLK NQKAKRGGRY
KKTR