Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_00020 |
Symbol | |
ID | 7314897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 2332 |
End bp | 3435 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643610405 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_002507760 |
Protein GI | 220930852 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTA CAATTTCCCA GAAAGATTTT TCCAGGAGCA TAAATATAGT CCAGCGCGCG GTTTCTTCTA AAAATACTAT GCCCATCCTC ACCGGAATTT ACCTTGAAGC CAGAAAAGAT AAAGGACTAC ACATGAAGGC AACAGATCTG GAATTAGGGA TAGAATACTG GGTTAAAGCA GATATTATAA CTGAAGGGAA AATAGTTTTA CCAGCCAGTC ATCTCAGTGG TATTATCAGG GAATTACCTG ATGACAATAT TAACTTTAAA GCTGACCTTG ATAAATATGA GGCTGAATTG ACCTGTTTAA GTTCCAGGTT TAAAATTAAG GGATTTGATG CTGATGAATT TCCCCAGTTA CCTGAGGTTA ACATTCCCCA CAAAATTACT TTAAATTGTG GTGACCTCAA TAGATTAATA GATGAAGTTA AATTTTCAAC TTCAACCGAC CAGACTCAAC CAGCTTTAAC CGGGGGTTCT ATGGTTATTG ATAGTGGTAA AATAAGGATG GTTGCTACCA ATACATACCG GCTATCCTTA TCTTCACTGG ATCTCGATGG TAGCCCTGAA GGAAAGAAAG AAGTAATTTT ACCGGGCAAT ACTTTAAGTG AATTAAGTCA TCTCCTTGAT GATGATGGAG AAGTCGAAAT TTTAATTGGG GATAACTATG TCAGGTTTAA TTTTAATGGT ATAGTCCTGG TATCCCGGGT TATAGAAGGG CAGTTTCCCA ATTACCAGCA GGTTTTACCA AAAGAATATA ACACTAAAGT CAGGGTTGAT CGTAATAATT TATTACGGTC AGTAAGAAGG GTGTCCCTGA TTGCACGGCT TGATTCCAAT GTAATTTCTA TTTCAGTTAA GGATAACAAA ATGATTATTA CATCCCAGGA TTCAGAAGAG GGTTTTGCCC GGGAAGAAAT TGAAATAGAA AGCCAGGGTC CTGAACAGAA TATTAATATA GATGCCGGTT ATTTACTTGA TGTCTTAAAG GTACTGAATG ATGATGTGGT TATTCTGGAA CTTATTGGAC CTTTAAATCC TTTAACTTTA AAGAAAGAAA ATAGTGATGA TTTTATTTAC CTGGTAATGC CCGTCCGCCG GTAA
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Protein sequence | MEFTISQKDF SRSINIVQRA VSSKNTMPIL TGIYLEARKD KGLHMKATDL ELGIEYWVKA DIITEGKIVL PASHLSGIIR ELPDDNINFK ADLDKYEAEL TCLSSRFKIK GFDADEFPQL PEVNIPHKIT LNCGDLNRLI DEVKFSTSTD QTQPALTGGS MVIDSGKIRM VATNTYRLSL SSLDLDGSPE GKKEVILPGN TLSELSHLLD DDGEVEILIG DNYVRFNFNG IVLVSRVIEG QFPNYQQVLP KEYNTKVRVD RNNLLRSVRR VSLIARLDSN VISISVKDNK MIITSQDSEE GFAREEIEIE SQGPEQNINI DAGYLLDVLK VLNDDVVILE LIGPLNPLTL KKENSDDFIY LVMPVRR
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