Gene Hoch_6876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6876 
Symbol 
ID8549300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9416207 
End bp9417241 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content72% 
IMG OID646391541 
Producthypothetical protein 
Protein accessionYP_003271233 
Protein GI262200024 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCCGA GAGCCAGACG GTTGCTTGCG GTCGTCCTGG CCGGCGTCGC GGTGCTCGCC 
GGCTTCTCGA TCTACGCCGA CATCGGCGAG CTCGGCGAGC GCCTCAAGAG CTTCGCGTGG
TGGGCGTTCG CCGCCGCGCT CGGGCTCGCG CTGGTCAACT ACGCGCTGCG CCTGGTCCGC
TGGTCGCTGT ATCTCGACCA CTGCGATCTC CAGGTGCCGC GCCACATCCG CGCCCTGGTC
TTCATCGCCG GCTTCGCCCT GTCGATCACG CCCGGCAAAC TCGGCGAGCT CATCAAATGC
TACCTGCTGC GCGAGAGCTG CGGCACGCCC GTCGCCCGCA GCGCGCCGAT CGTCATCGCC
GAGCGCGTCA CCGATCTGCT CGCGCTCATC ATCCTCGGCC TCATCGGCGT GGCGCTCTAC
GGCGTCGCCC GCGGCATGGT GGTGGCCGGC GCGGCCGTCA TCCTGTTGGT CCTGCTGGTC
CTGGCCTGGC CGCGGCTGGC CCACTTCGCC ATCCGCATCG CCACCCGCCC GCGCCCCCTG
CGGCGCTTCG AGGAGCGCCT GCGCAAGCTC TACGATGGCC TCGCCGCGCT GCTGCGGCCG
CGGCCCCTGA GCTGGGCCAC CGCGCTCGGC GTCGTCGCCT GGCTGGCCGA ATGCATCGGC
TTCTCCATCA TCGCCAACGG CTTCGTCGGC GCCGCGGTGC CGCTCGGCCT GGCCACCCTG
GTCTACGCCG CGACCACGGT CGCCGGCGCG CTGTCCTTTT TGCCCGGCGG CCTGCTGGTC
ACCGAGGCCT CGATGGCGCT GCTGCTGGTC GAATCCTCGA CCGGCATGGA CGAGGCCGCG
GCCGTGGCCG CGACCATCCT CACCCGGCTG GCCACGCTGT GGTTCGCCGT GCTCCTCGGC
CTCATCGCGC TGGCCGTACT ACACCGCATC GCGCCCGAGG CCATCGCCGC GCTCGACAAC
GCCGAGCAGA CCTCGGCCGA CGCCGCGCAG ACCTCGGCCG ACGCGACCAA CCGCGACGCC
GACCCCGCGC CCTGA
 
Protein sequence
MNPRARRLLA VVLAGVAVLA GFSIYADIGE LGERLKSFAW WAFAAALGLA LVNYALRLVR 
WSLYLDHCDL QVPRHIRALV FIAGFALSIT PGKLGELIKC YLLRESCGTP VARSAPIVIA
ERVTDLLALI ILGLIGVALY GVARGMVVAG AAVILLVLLV LAWPRLAHFA IRIATRPRPL
RRFEERLRKL YDGLAALLRP RPLSWATALG VVAWLAECIG FSIIANGFVG AAVPLGLATL
VYAATTVAGA LSFLPGGLLV TEASMALLLV ESSTGMDEAA AVAATILTRL ATLWFAVLLG
LIALAVLHRI APEAIAALDN AEQTSADAAQ TSADATNRDA DPAP