Gene Hoch_6871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6871 
Symbol 
ID8549292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9407502 
End bp9407945 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content67% 
IMG OID646391533 
ProductCMP/dCMP deaminase zinc-binding protein 
Protein accessionYP_003271228 
Protein GI262200019 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.385283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCG CGCTTGAAGA AGCGCGGCTG GCTGGAGATG CTGGCGACGT ACCCGTCGGG 
GCGGTGATCG TCTGCGATGG CGAGATCATC GCCCGCGGTC GCAACCGCCG GCAGTTGGAT
AAGGATCCCA CTGCTCACGC CGAGGTCGAA GCGCTGCGAA GCGCGAGTCG CTCACTCGGT
AACTGGCGCG TCGAGGGGAC GCTCTACGTC ACCCAGGAGC CGTGTCCGAT GTGCGCAGGA
GCGCTCGTCA ACGCGCGGGT CCAACGGTTG GTGTACGGGT GTCCGAATCC CAAGGCCGGC
TCGGTCCACA CGCTGTACCG GCTGGTGTCC GATGCGCGGC TCAACCACCG TATAGAGGTG
CGCGGTGGTG TCAGCGCCCA GGCCTGCACT GGGTTGCTCA AGAGCTTCTT CGCCGCGCTG
CGCAGGGAGC GTTCGCGAAG GTGA
 
Protein sequence
MAAALEEARL AGDAGDVPVG AVIVCDGEII ARGRNRRQLD KDPTAHAEVE ALRSASRSLG 
NWRVEGTLYV TQEPCPMCAG ALVNARVQRL VYGCPNPKAG SVHTLYRLVS DARLNHRIEV
RGGVSAQACT GLLKSFFAAL RRERSRR