| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6847 |
|---|
| Symbol | |
|---|
| ID | 8549266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 9382282 |
|---|
| End bp | 9383661 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646391507 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003271204 |
|---|
| Protein GI | 262199995 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0901572 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCT TACTTCGAAA CTCCGCCAAG CGCAGCGCCT GGATACTCGG CGCCGCTGCG
ACCCTGCTCA GCGCCGGCTG CGCGCAGATC CTGGGCATCG AGGGGCTCTC TGGCCAAAGC
GGCGACGGCG GCCCCACGCC CGGCGACGGC GGCGGCCCGT TCGACGCTGG CCCCATCGAC
GCCCCCATCG ACAGCGGCCT CAATCTGAGC TGTGCTGAGG ACGAGCTCAG CGAGGGCGTC
GGCGTATTCG AGTTCGACAC CACAGCCGCG GGCAACGAGT TCTCGGCCAC CTGCGGCGGT
GGAGACAGCC CCGATCAGAT GCTGCGCTGG CGCGCGCCGG TCACCGACTA CTACGTCTTC
GACACCTTCG CCTCCGAATA CGACACGGTC CTGGCCCTGT TCGACGAGTG CGGCGGCAAC
GAGCTGTCGT GCAGCAACAA TATCGGACAG ACGGTCCAAT CCGAGCTCGT GCGCAAATTC
GAGCAGGGCC AGGAGGCCTT GATCCTGCTC GACGGCGCGG TCGGCGACAG CGGCACCGCC
ACGCTCAACA TCGAGCGCGT GACCTGCCCC GACGCCGATC TCGAGGGCCA GACCTTCCCC
GTGCAGCTCT CGACCGTGGG CTTTGGCGAC GACTTCGCCG GTGCCTGCGG CGGCGCCGGC
CACGAGGACC GCGGCTACAA CTGGGTCGCG CCCGCCGATG GCCTGTACTA TTTCCGCGCC
ACCTCCGAGA CCTTCACGCC GGTGCTGTCC GTGGTCGACG GCGGCCGCTG CAGCGACCTC
GAGCTCGGCT GTAACGCCGC CCAGACCGGC CGCTTCGGCG CCGAGGTCGT GCGCTTCGTG
CGCGCTGGCC AGCCCGTGAG CGTGCTGGTC GACGGCCGCG ACGGCGCCGG CCTGTTCGAC
CTCGACATCG GCCTGCAGGA CGGTCCGAGC TGCCCCGAGG AGCCGCTGCC CGACGACGAT
ACCCTCGAGA TAGCGCTGAA CGAGCGCAGC CTGGCGCCGA GTTGCAGCTT CGCCCGCCAC
GGCAACAACT TCGGCGAGGA GACCGAAGCC CCCGATCGCA CCTTCAGCTT CGCCGTGCCC
TCGATTCAAC CGCCAGCGGG TGGCGGCTGC GAGGTGACCA TCACCGCCAA CCTGCCCTTC
GTGCTGTACG CGCTGGAGGG GAGCGATTGC GGCGGCGCCG AGGTCGATTG CCGGTTTTCG
GACACCGACC CCAACGGCGA CCACGTGGCC ACCGTCGGCT TCACCATGCA GACCGAGGAG
ACGGAGTTCG TCGTCGTGGT CGCCGGACAC CCGAACAATT TCAACAACGC GGACCTGCTG
TTCAGCGCCG AGCTCGGCTG CTTCGCGGTC GCCCAGCAGC CGGAGAGCAA GCCCGAGTAG
|
|---|
| Protein sequence | MPALLRNSAK RSAWILGAAA TLLSAGCAQI LGIEGLSGQS GDGGPTPGDG GGPFDAGPID
APIDSGLNLS CAEDELSEGV GVFEFDTTAA GNEFSATCGG GDSPDQMLRW RAPVTDYYVF
DTFASEYDTV LALFDECGGN ELSCSNNIGQ TVQSELVRKF EQGQEALILL DGAVGDSGTA
TLNIERVTCP DADLEGQTFP VQLSTVGFGD DFAGACGGAG HEDRGYNWVA PADGLYYFRA
TSETFTPVLS VVDGGRCSDL ELGCNAAQTG RFGAEVVRFV RAGQPVSVLV DGRDGAGLFD
LDIGLQDGPS CPEEPLPDDD TLEIALNERS LAPSCSFARH GNNFGEETEA PDRTFSFAVP
SIQPPAGGGC EVTITANLPF VLYALEGSDC GGAEVDCRFS DTDPNGDHVA TVGFTMQTEE
TEFVVVVAGH PNNFNNADLL FSAELGCFAV AQQPESKPE
|
|---|
| |