| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6686 |
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| Symbol | |
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| ID | 8549103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 9164718 |
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| End bp | 9165920 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 646391345 |
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| Product | Ribonuclease D |
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| Protein accession | YP_003271044 |
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| Protein GI | 262199835 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTTCCGAAT CAGCCTCGCA CCCGACTCCG CTTACCGACG CCGCCTCAGT CGCCGCCGTC
GCCGCGCGCG TGGCGGCCGC CGGCGCCATG GCCTTCGACT TCGAGTTCGC GTCCGACGGC
CGCTTCCTGG CCGAGCTGGC GCTGGTCCAG GTGTCCTGGG GCGACCCCGA GGCGCCCGAG
ATCGCCCTCA TCGATAGCGT CGCGGTCGAT CCCACGCCGG TGCTGCGCCT GATCGGCGAC
CCGGCCGTGG TCTCGGTGGC GCACGCGGCC AAGCAGGATC TCGGCATCCT GGCCGCGCGC
TTCGACATCT TCGCCGAGAA TTTCTGGGAC ACGCAGATCG CGGCCGCCTT CGTCGGCATG
GCCGAGCAGA TCGGCTACGG CAAGCTGGTC GACGCGCTGC TCGGGGTGCA GCTCGACAAG
GCCAGCCAGT TCACCAAGTG GCTCGAGCGT CCGCTGAGCC CGGCGCAACT GCGCTACGCG
GCCGATGACG TGCGCTACCT GCCGCGGGTC TGGGCGCATC TGAGCCAGCG CCTGGACGAG
CTCGGCCGGC GCGCGTGGGT GGGCGAGGAG TCGGCGCTGC TGGCCCGCGA CGCCATGCCC
TACGGGCCCG CCGAGCTAGC GTATCACTCG CTCAAGGGCG CGGGCGCGCT GCGCGGCAAG
GCGCTGGGTC GGCTGGCGGC GCTGGCGGCC TGGCGCCAGG AGCGCGCGCT GGCCGACAAC
CTGCCGCTGT CGTGGGTGCT GCCGGACAAG GCGCTGCTCG AGCTGAGCCG CCGGGGCGCG
CGCGGGCCCG GCGACGTGCG CAACGCGCCC GGGGTCACGG GCACCATCGC CCGGCGCTAC
GCGGACGCCA TTGTCAGCGC GCTGCAGGGT GCCGGCAAGC CGCCCGCGGG TGCGCCGCCG
AGCCGCGGGC CGAGCCTCGA CGACGGCGCC CGGCTGCGCG TGCCCGTGGT CATGGCCATG
CTCCAGACGC GCGCGGCCGA GGCCGGTATC GCCGCGCGCT TCGCGGCCAC GCGCGCCGAC
GCCGAGTCGC TGGTGGCGTG GCACGCGGCC GGCGGCGACG AGGGCGAGCG CGACGGCGTG
CCGCTGCTCG AGGGCTGGCG CCGCGACCTG TTCGGCGACG CCGCCCTGGC CTGGCTGCGC
GGCGAGCGCG CGCTGCGCTG CGATCCCGGG TCGGGCGCGC TGCGCCTCGA CGGCGAGAGC
TGA
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| Protein sequence | MSESASHPTP LTDAASVAAV AARVAAAGAM AFDFEFASDG RFLAELALVQ VSWGDPEAPE
IALIDSVAVD PTPVLRLIGD PAVVSVAHAA KQDLGILAAR FDIFAENFWD TQIAAAFVGM
AEQIGYGKLV DALLGVQLDK ASQFTKWLER PLSPAQLRYA ADDVRYLPRV WAHLSQRLDE
LGRRAWVGEE SALLARDAMP YGPAELAYHS LKGAGALRGK ALGRLAALAA WRQERALADN
LPLSWVLPDK ALLELSRRGA RGPGDVRNAP GVTGTIARRY ADAIVSALQG AGKPPAGAPP
SRGPSLDDGA RLRVPVVMAM LQTRAAEAGI AARFAATRAD AESLVAWHAA GGDEGERDGV
PLLEGWRRDL FGDAALAWLR GERALRCDPG SGALRLDGES
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