| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6659 |
|---|
| Symbol | |
|---|
| ID | 8549076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 9128720 |
|---|
| End bp | 9129883 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646391319 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003271018 |
|---|
| Protein GI | 262199809 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATGT CCGGGTTTGT TTCGCATTCC GCAATTCGCG TCGGCGCGCT GTCGCTGCTG
CTGGCGCTGA GCACGGCGAC TGGCTGTGGT GACGACGGCG GCGACGGTGG CTCGTCGCCC
GACGCCGCCG CGGCCGACGC CGCCGCGGCC GACGCCGCCC CGCAGCCGGA CGCCGGCCCG
CCCGTCGCCG CGATCGAGGT CTCGGATACC GAGATCTCGG TGACCGAGGG TGACGGGACG
GGTCAGACCA TCACCGTGCG CCTCAGCGCG GCGCCGGCCG CGGCCGTGAG CGTCACGCTC
AGCTCGAGCG ACGAAGAGGT GGTGGTAGCG ACGCCGGCCA GCTTCGATTT CGGCAGCGAC
GATTTCGCCG ACGAGCAGAC CGTGACCGTG ACCGCGCCCG ACGACGACAG CGCCGACAAC
GAGAGCGCCA CGCTCACCTT CTCGGCCGAC GGTTACGCCG ACGTCGTGGT CACGGTGCAG
ACCATCGACA GCGACGCCAT GAACATCGTG GTCGACGGCA GCGACACGAG CCTGATCGAG
GGCGCCAGCG AGACCCGCGA GCTGCGTTTG TCGATCGCGC CCGCAGGCGC CTTTGAAGTA
GCCCTGAGCA GCAGCGACGA CGCGCTGGTC AGCGTGGAGC CGGCGACGCT GAGCTTCGAC
GCCGACAACT TCGACCAGCC GCAGGAGTTC ACGATCACCG CGCTGCGCGA CGACAACGAC
ACCGCGGACA GCGCCACCAT CACGCTGCGC GCCAGCGGCG ACGACACCGT GCCCAAGGTC
TCGTTCGACG TCACGGTCGC CGAAGAAGGC ACGCCGCCGC TGGGCGTGCT CTACGTGCGC
GGCAGCTTCA ACGACTTCGG CGTCACGGCG CCGATGAGCT ACGAGGCCTC CAGCGGCCTG
TACGAGGCCG AGCTGGTGCT CTCCGACGCC GTGCACGGTT TCAAGATCGC CGATGAAGGC
TTCTCCGACG ACGCGACATA CTCGATCGAC GCCAACGCCG AGGTCGAGCT GCCGGTCGGC
GAGACCCGCG AGCTGGTGGT GGCGATTGGG TTTGGCAACA ACACCCTGCT CGACCTGCAG
GCCGGCGGCG GCGTCTACGA GTTCACGGTC GACGCCAACG ACCCGGCCAA GCCGACCTTG
GTGGTCCGCG AAGCCCAGCG CTGA
|
|---|
| Protein sequence | MQMSGFVSHS AIRVGALSLL LALSTATGCG DDGGDGGSSP DAAAADAAAA DAAPQPDAGP
PVAAIEVSDT EISVTEGDGT GQTITVRLSA APAAAVSVTL SSSDEEVVVA TPASFDFGSD
DFADEQTVTV TAPDDDSADN ESATLTFSAD GYADVVVTVQ TIDSDAMNIV VDGSDTSLIE
GASETRELRL SIAPAGAFEV ALSSSDDALV SVEPATLSFD ADNFDQPQEF TITALRDDND
TADSATITLR ASGDDTVPKV SFDVTVAEEG TPPLGVLYVR GSFNDFGVTA PMSYEASSGL
YEAELVLSDA VHGFKIADEG FSDDATYSID ANAEVELPVG ETRELVVAIG FGNNTLLDLQ
AGGGVYEFTV DANDPAKPTL VVREAQR
|
|---|
| |