| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6606 |
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| Symbol | |
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| ID | 8549023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 9060728 |
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| End bp | 9061909 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646391266 |
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| Product | HtrA2 peptidase |
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| Protein accession | YP_003270965 |
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| Protein GI | 262199756 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.211294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.127864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCAT CGCCGCTGCC GTCGCCGTCC CGCGTTTGCC CTCTGCCCGC CGCGTCCGCG
CCGTCCCCGC ACACCGCCCG GCGGACGCGC GCACGCGCCC CGCTGCTGAG CCTGGCCCTG
AGCCTGGGCC TGGCGCTGAC CCTGGCGTCG GCCGCGCCCG GCGATGCCCG GGCGCAGCTC
CTGCGCGGCG ACGACACCAC CATCTCCGAC GTCACCGAAA AGGCGCTGCC CAGCGTGGTC
AATATCTCGA CCACCACCTC GCAGTCCGCG CGCGGGCCCT CGTTCTTCGA TCCCTTCTTC
AACGACGAAA ACTCACCCTT TCGCGGCCGC CCCGGCAAAC GCTACGGCCA GAGCCTGGGC
TCGGGCGTCA TCATCTCGGC CGACGGCTAC GTCATCACCA ACAGCCACGT GGTCGAAGAC
GCCAAAGACA TCCGCGTCTC ACTCTCAGAC GGCCGCGAGC TGAGCGCCAA GATCGTGGGC
AGCGACCCCA AGAGCGACCT GGCCGTGCTC AAGCTCGAGG GCGCGAGCGG GCTGCAGCCC
ATCCGCATCG GCCGCTCGAG CAACATCCGC CTGGGCGAGA TCGTGCTCGC CATCGGCAAC
CCCTTCGGCG TCGGCCAGAC CGTGACCATG GGCATCGTCT CGGCCAAGGG CCGCTCGGGC
ATGGGCATCG TCGACTACGA GGACTTCATC CAGACCGACG CCGCCATCAA CCCGGGCAAC
TCGGGCGGCG CGCTGATCAA CCTGCGCGGC GAGCTGATCG GTATCAACAC CGCGATCCTG
TCGCGCACCG GCGGCTACCA GGGCATCGGC TTCGCCATCC CCACGGACAT GGTCGCGCCC
ATCAAAGACA GCCTCATCCG CGACGGCGCC GTGGCCCGCG GCTTCCTCGG CGTCAACATC
CAGACCCTGA CCAGCGAGCA GGCGCGCGCC GCCGGCGTCC CCGACCTGCG CGGCGTCTTG
ATCACGCGCG TGGTCGAACG CAGTCCGGCC GCCCGCGCCG GCCTGCGCCG CGGCGACATC
ATCACCCGCG TCGGCGACCG CATCACGCTC ACGGCCGCGC ACGTGGTCAA CTCCGTGGGC
ATGAGCCGTC CCGACAAACG CCTGGCCCTG ACCATCATGC GCGACGGCAA GACGCGGCGC
GTCGCAGTAA AACTTGGCGA TTTATCGCAG GTGCCGGAAT AA
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| Protein sequence | MNSSPLPSPS RVCPLPAASA PSPHTARRTR ARAPLLSLAL SLGLALTLAS AAPGDARAQL
LRGDDTTISD VTEKALPSVV NISTTTSQSA RGPSFFDPFF NDENSPFRGR PGKRYGQSLG
SGVIISADGY VITNSHVVED AKDIRVSLSD GRELSAKIVG SDPKSDLAVL KLEGASGLQP
IRIGRSSNIR LGEIVLAIGN PFGVGQTVTM GIVSAKGRSG MGIVDYEDFI QTDAAINPGN
SGGALINLRG ELIGINTAIL SRTGGYQGIG FAIPTDMVAP IKDSLIRDGA VARGFLGVNI
QTLTSEQARA AGVPDLRGVL ITRVVERSPA ARAGLRRGDI ITRVGDRITL TAAHVVNSVG
MSRPDKRLAL TIMRDGKTRR VAVKLGDLSQ VPE
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