| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6539 |
|---|
| Symbol | |
|---|
| ID | 8548956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 8972717 |
|---|
| End bp | 8974717 |
|---|
| Gene Length | 2001 bp |
|---|
| Protein Length | 666 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646391202 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003270901 |
|---|
| Protein GI | 262199692 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000789727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGG AATCGAGTAA CGGAATCGAG CAATTCAAGA CACGGAAAGG TAGACAATCT
GTCTACACCA ATCCGCTCAG GCTCCTGGCC GCCATGGCAT TGGCGGCGAT GGTATCGGCC
TGCGCCATCG ATGCCCCGGG AGGCGCCGAC ACATCGGCCG GCATCGCAGC CGAGCCGGCG
GGCACCTGCG AGCACGAGCC GTGCGAGGCC GGCGGTCCCC TGGACCCGGC CTGCGACGAC
TGCGTGCTCA CGGTGTGCGA CGAGGACGCG TTCTGCTGCG AGGTCGAGTG GGACGACCTG
TGCGTGGAGA ACGCCGAGAT CCTGTGCGGT CTCGACTGCG GCATCGAGGA GTGCGAGCAC
GACGTGTGCG TCACCGGCAC GCCGCTGTCC GAGACCTGCG ATCCCTGCGT GACCCAGGTC
TGCGACGCCA ATGCGGCCTG CTGCTCCACC GGCTGGGATG ACTCCTGCGT GGCTGCGGCC
GAGGCCCTGT GCGGCGTCGA CTGCGGCGTG GCTCCGGTGT GCGGCGACGG CACCTGCGAC
GCGGCCGCCG GCGAGGACTG CACCACCTGC GAGGTCGACT GCGGCCCCTG CGGCGGCGAG
TGCGAGCACG ACCTGTGCGA CGCCGGTACG CCGCTCGATC CGAGCTGCGA CACCTGCGTG
GCCGATGTCT GCGAGCTGGA CTCGTTCTGC TGCGAGGTGG AGTGGGACGA CGTCTGCGTC
GGCCTGGCCG TGGACACCTG CGGTATTGAC TGCGGTGTGG AGCCGGGCTG CGGCGACGGC
GTCTGCGACC CCTCGCTCGG CGAGGACTGC AACACCTGCT CGGCAGACTG CGGCCCCTGC
GGCGGCGAGT GCGAGCACGG CTTCTGCGAT ATCGGCCCGC CGCTCGATCC CACCTGCGAC
ACCTGCGCGG CCGATGTCTG CGCCGCCGAT GACTTCTGCT GCACGGTCGA GTGGGACGAC
GTCTGCGTCG GCCTCGCGGT CGATCTCTGC GGCGTGGACT GCGGCGTGGA GCCCGGCTGC
GGCGACGGCG TCTGCGATCC CTCGGTCGGC GAGGACTGCA ACACCTGCTC GGCCGACTGC
GGTCCCTGCG GCGGCGAGTG CGAGCACGAC TTCTGCGACG CTGGCGCCCC GCTCGACCCC
GCCTGCGACA CCTGCGCGGC CGATGTCTGC GCTATCGACG ACTTCTGCTG CACGGTCGAG
TGGGACGACG TCTGCGTCGG CCTGGCCGAG GACACCTGCG GTCTCGACTG CGGCGGCGCC
GGCGAGTGCG AGCACGACCT GTGCGAGGCT GGCTCGCCGC TCGAGCCCAC CTGCGACGCC
TGCGTGGCCG GCGTCTGCGC GCAGGATTCG TTCTGCTGCG ATGAGGCCTG GGACGCCTCC
TGCGTGGCCG CGGCCGAGGC CCTGTGCGGT CTCGAGTGCG GCGGCGGCGA GTGCGAGCAC
GACCTGTGCG AGGCCGGTAC GCCGCTCGAT CCCACCTGCG ACGAGTGCGT CAACGAGGTC
TGCGCCATCG ACTCGTTCTG CTGCGAGGTC GAGTGGGATG ACCTGTGCGT CGGTCTGGCC
GAGGACACCT GCGGCCTCGA CTGCGGCGGC GGCGGCGACG AGTGCGAGCA CGGCCTGTGC
GAGACCGGCG CGCCGCTCGA CCCGACCTGC GACGACTGCG CGCAGACGGT CTGCGACGCC
GACAGCTTCT GCTGCGAGGT CGCCTGGGAC GGCATCTGCG TCGGCCTGGC CGAGTCGCTG
TGCGGCATCG AGTGCACCGC GCCGCCCGAG TGTGGCGACG GCGTGTGCGA GGGTGACGAG
AACTGCGTGA CCTGCGCCAG CGACTGCGGC GAGTGCGCCG AGTGCCCGCA CGACGTGTGC
GAGAGCGGCG CCGCGATGCC CTTCGGCTGC AACACCTGCG TGCCGATCAT CTGCAAGATC
GACAGCTTCT GCTGCGACGT GTCGTGGGAT TCGCTGTGCG TCGGCCTGGT GCCCGAGCAC
TGCGGACGCT CCTGCGAGTA A
|
|---|
| Protein sequence | MKTESSNGIE QFKTRKGRQS VYTNPLRLLA AMALAAMVSA CAIDAPGGAD TSAGIAAEPA
GTCEHEPCEA GGPLDPACDD CVLTVCDEDA FCCEVEWDDL CVENAEILCG LDCGIEECEH
DVCVTGTPLS ETCDPCVTQV CDANAACCST GWDDSCVAAA EALCGVDCGV APVCGDGTCD
AAAGEDCTTC EVDCGPCGGE CEHDLCDAGT PLDPSCDTCV ADVCELDSFC CEVEWDDVCV
GLAVDTCGID CGVEPGCGDG VCDPSLGEDC NTCSADCGPC GGECEHGFCD IGPPLDPTCD
TCAADVCAAD DFCCTVEWDD VCVGLAVDLC GVDCGVEPGC GDGVCDPSVG EDCNTCSADC
GPCGGECEHD FCDAGAPLDP ACDTCAADVC AIDDFCCTVE WDDVCVGLAE DTCGLDCGGA
GECEHDLCEA GSPLEPTCDA CVAGVCAQDS FCCDEAWDAS CVAAAEALCG LECGGGECEH
DLCEAGTPLD PTCDECVNEV CAIDSFCCEV EWDDLCVGLA EDTCGLDCGG GGDECEHGLC
ETGAPLDPTC DDCAQTVCDA DSFCCEVAWD GICVGLAESL CGIECTAPPE CGDGVCEGDE
NCVTCASDCG ECAECPHDVC ESGAAMPFGC NTCVPIICKI DSFCCDVSWD SLCVGLVPEH
CGRSCE
|
|---|
| |