| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6522 |
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| Symbol | |
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| ID | 8548939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 8953168 |
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| End bp | 8953857 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646391185 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003270884 |
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| Protein GI | 262199675 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCTGG TGACCGGTGG CAACCGCGGC ATCGGCCTGG CCATCTGCCG CCAGCTCGGC
GAGCGCGGTG TGCGCGTGCT GGTGGGCGCG CGCGATCCCG CCAAGGGTGA GGCCGCCGTG
GCCAAGCTGC GCGCGGGCGG CGCCGCGGCC TCGCCCTTGC GCATCGCGGT CGATGAGCCG
GCCAGCGTGG ACGCCGCCTT TGCGCACGTG CGCAAAGAAT TCGGACGGAT GGACATACTC
GTCAACAACG CCGCCATCGC CATCGACGGC CCGGGCACCG TGGCCACGCT GAGCGAGGCG
GTGCTGGCCG AGACCCTGCA GACCAACCTC TTCGGCGCGC TGCGGGTGGC GCAGGCGGCG
CTGGCGCTCA TGCGCGAGCG CGACTACGGC CGCATCGTCA ACGTCTCCAG CGGCCAGGGC
TCGTTCACCA AGATCGACCG CAGCAAACCC GCCTACCGCC TGTCCAAGAC CGCGCTCAAC
GCGCTCACGC GCATGCTGAC CGACGAGTGC GCCGGCAGCG GCATATTGGT CAACGCCATG
ACCCCGGGCT GGGTGCGCAC GCACATGGGC GGGGTGCGCG CGCCGCGCAG CGTGGACGAG
GGCGCCGACA CCGCGGTGTG GCTGGCGACC CTGCCGGCGG ACGGCCCGCG CGGCGGGTTC
TTTCGCGATC GGCAGCCCTT TCCGTGGTGA
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| Protein sequence | MALVTGGNRG IGLAICRQLG ERGVRVLVGA RDPAKGEAAV AKLRAGGAAA SPLRIAVDEP
ASVDAAFAHV RKEFGRMDIL VNNAAIAIDG PGTVATLSEA VLAETLQTNL FGALRVAQAA
LALMRERDYG RIVNVSSGQG SFTKIDRSKP AYRLSKTALN ALTRMLTDEC AGSGILVNAM
TPGWVRTHMG GVRAPRSVDE GADTAVWLAT LPADGPRGGF FRDRQPFPW
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