Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_6504 |
Symbol | |
ID | 8548921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 8933616 |
End bp | 8934803 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646391167 |
Product | Saccharopine dehydrogenase |
Protein accession | YP_003270866 |
Protein GI | 262199657 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.752719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGAG TCCTCATCAT CGGTGCGGGC GGCGTCGGCG GCGTGGTGGC GCACAAGTGC GCTCAGGTCC CCGACGTCTT CTCCGAAATC CTTCTCGCCA GCCGCACCGT GTCGCGTTGC GAAGCCATCC AGGCGCAGAT CCGCGAGATG TATGGTCGCG AGATCCGCGT GGCCGCGCTC GACGCCGATC AGGTGGAACA GACCGTCGCG CTGCTGCGCG AGTTCCGGCC GCACCTGGTC ATCAACGTAG CACTGCCATA TCAAGATTTG CACATCATGG ACGCCTGCCT CGAGGCCGGC GTGGACTACC TCGACACCGC CAACTACGAG CCGCCCGATG AGGCCAAGTT CGAATACAAA TGGCAGTGGG CGTATCACGA TCGCTACGCC AAGGCCGAGC GCATGGCGCT GCTCGGTTCG GGCTTCGATC CCGGCGTGAC CAACGTCTTT TGTGCCTACG CGCAGAAGAA GCTGTTCGAC GAGATCCACT ACATCGACAT CCTCGACTGC AACGCCGGCG ACCACGGTCA CCCCTTCGCC ACCAACTTCA ATCCCGAGAT CAACATCCGC GAGATCACGC AGCGCGGACG CTTCTGGGAG GATGGTTCTT GGAAGGAAAC CGACCCGCTG TCCGTCCACC AGACCTTCGA CTTCCCCGAG GTCGGCCCGC GCAAGGCCTT CCTGCTGTAC CACGAGGAGA TGGAGTCGCT GGTCGAGAAC ATCGACGGCC TGCGCCGCAT CCGCTTCTGG ATGACCTTTG GCGACGAGTA CCTCACCCAT CTGCGCGTGC TGCAGAACGT GGGCATGACC GGCATCGAGC CGGTGGCGTT CCAGGGTCAG GAGATCGTGC CCATCCAGTT CCTCAAGGCG CTGCTGCCGG ATCCCTCCTC GCTGGCCGAG AACTACACCG GCAAGACCTC CATCGGCTGC CTCATCGAAG GCGTCAAGGA CGGCAAGCCC AAGAAGGTGT TCATCTACAA CGTCTGCGAT CACGCCAAGT GCTACCAGGA AGTGCGCGCC CAGGCGGTGT CGTACACCAC CGGCGTACCG GCCATGATCG GCGCAAAGAT GATGCTCACG GGCGCGTGGC GCGGCAACGG CGTGTTCAAC ATGGAGCAGC TCGACCCCGA GCCCTTCATG GAGGCGCTAA GCGAGCACGG CCTGCCCTGG CACATCAAAG ACATGTAG
|
Protein sequence | MSRVLIIGAG GVGGVVAHKC AQVPDVFSEI LLASRTVSRC EAIQAQIREM YGREIRVAAL DADQVEQTVA LLREFRPHLV INVALPYQDL HIMDACLEAG VDYLDTANYE PPDEAKFEYK WQWAYHDRYA KAERMALLGS GFDPGVTNVF CAYAQKKLFD EIHYIDILDC NAGDHGHPFA TNFNPEINIR EITQRGRFWE DGSWKETDPL SVHQTFDFPE VGPRKAFLLY HEEMESLVEN IDGLRRIRFW MTFGDEYLTH LRVLQNVGMT GIEPVAFQGQ EIVPIQFLKA LLPDPSSLAE NYTGKTSIGC LIEGVKDGKP KKVFIYNVCD HAKCYQEVRA QAVSYTTGVP AMIGAKMMLT GAWRGNGVFN MEQLDPEPFM EALSEHGLPW HIKDM
|
| |