| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6500 |
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| Symbol | |
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| ID | 8548917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 8929274 |
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| End bp | 8931658 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 646391163 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_003270862 |
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| Protein GI | 262199653 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCGTC GCGACCTGGT CGCGCTGCTG GCGATCGCGC TGAGCCTGAG CCTGAGCCTG
GCCGCGCTCG GTGGCGTGCC GCGCTGGGCC GCGTGCACGG GCGCGGCCCT GGGTCTGGCC
TGCGCGCTGC CCTACCTCGG CGCCCGCCGC CGCATCGATG CGCGCGCGCC GCTGGTGCTC
GCGGCCGGTT TCGCCGCCCT GGCCACGGCC GTCCAGTGCC TGCCGCTGCC GGCCGGCCTG
GTCGCCTGGC TGTCGCCCGC GCGCCACGCC GCCAGCGCCG AGGTCGCGCG TCTGCTCGGC
GAGCCGCTGC CGGGTTTCCT GGCGCTGTCG CACGAACCCG CCGCCACCCT GGTGCACCTG
GCCAGCGCCG CCGGCTTGCT GGCGCTGGCG TACGCGGCCG TGCGCGTGGC CGGCCGGCGC
AGCGGCGCGC TGTGGCTGAT GCGCATCGCG GCCGGCTGCG GTGCGGCCAT GGCGCTGTGC
GCGCTGATCC ATGGCTTCTT CGGCGTCGAC GCGCTGTTCG GCGTGTACCG CCCCAGCCAG
GCCACGCCCG CGTTCCCGGC GCCGCTGCTC AACGACAACC ACCTGGCCGG CTTCCTGTCG
CTGTGCGCGC CGCTGGCCCT GGCCCTGGCG GTCGCGCGTC CCGGCGCCGA ACGCGCCGGC
TGGCTGCTGG CCGTGCTCGC CATCGCCGCC ACCAACCTGC TCGTGGCCTC GCGCATCGGC
GCGCTGTCGC TGTGCGCCGG GCTGCTGGTC GCGGGCGCGC TGCTGGTGGC CGAGGCGCAG
CGGCGACCGG GCCGCCGCAT CGAGCGCGCC GTGCTCATCC CGGGCGCCAT CATCGCCGCG
TGCGCGGCCG TCCTGGTGGT GAGCAGCGCG GGCGCGCGCG TGGGCCAGGA GCTGGCCGAG
ACCACGCGCG CCGAGCTCGA CGACCCGCGC AGTAAGTTCC AGGTGTGGCA GCGCTCCATC
GACCTGGTGT CCGAACACCT GTGGACCGGC GTCGGCAGCG GCGGCTTCGA GCCCACCTTC
ACCCGCCTCG ACGGCACCAG CATCAAGACC TACTCGCATC TCGAGAATGC CTACCTGCAG
ATCCTGGTCG ATTTCGGCGC CCCGCTCGCG GCCGGTTTCG CGATCCTGGG CCTGTGGCTG
GCCCTGGCCG CGCTGCAACG CCGCCGCCAG GATCCCCTGT GCGCCGGCGC GCTGGCCGGA
TGCACGGCCA CGGCCGTGCA CGCCTGCGGC GATTTCCACC TGGCGCTGCC GGGCGTGGCC
GCCACCCTGG TGATCGTGCT GGCCGTGCTC GTGCCCGCGC GCCTGCGCTC GCCGGCGCCG
CGGCGCCGCG TGCTGACGCC GCGCATCGCC GGCCTGCTGC TGGGCGCGGG CGCGGTGGCG
CTGGCCGCGT CGCCGCTCGG CCAGGGCGCG CGCGCCGCCG AGGACCGCGT CCGTGCCGAA
CTCGATCGCT CGTCCGAATT ACGCGCGCGC GGCGAGCGCG AGGGTGCGGC CGCGGCCGAG
ACCCGCGCGC TGCGCATCGG CCGCGCCCAG GTCGCCCGCC ACCCCAGCGA CTACCTGCTC
GCCGGCCTGC TCGCCGAGGC CCACTTCCGC CGCCGCGACC CGGCCTCGGT GGCCTGGATC
AACCGCGCTC TGCAGCTCAA CCCCAGCCAC GCCGGGCTAC ACGTGCTGGC CGCGCGCATG
CTGCTCACCG CCGGACACCG CGACCAGGCC CTGCTCGAGT ACGCGGCCGC GCTGCGCCAC
ACGCTCACGC CGCGGCCACT GCTGGGCGAC CTGGTGCGCT GGTTCGCCGA CCCGAGCGAG
GCCGCGCGCG GCATCCCGGC CAGTCGCGAG CGGCTGCCCA TTCTCAGCTC GTGGCTGCTG
GCCATGGAGC GCGGCGACGT CGCCCTGGCC TACGCGCGCC GCGTCTACGC CGAACACGCG
GACGATCACG AGGTGCAGCG CGTCGTCGCC GATCTGGCCT GGAGGCAGGG TGACCATGTC
CTGGCCCGGA GCGCGGCCGA GCCCGCCTAC GCGGCCACCG GCGCGCTCGC CGAAGCTCTG
ATCCTCGGCC AGGCGCTGCA CGCCCAGGGA CGCGAGGACG AGGCCGCCCG CGTGCTCGTC
GAGGCCATCG CCGCGCGCCG CTACGACGAG CTGTGGCAGC TCACGCGCGC GCACCAGGTC
CTCGCCGAAG TCGAAGACGC CCGCGGCGAC CCTCTGGCCG CGCGCACGCA CCTGCGCACC
GCCATCCGCC TGGCGCCAGC CCACGCCGGG CCCGCGGTGC GCGCCGACCT GCAGCGCCGG
CTGGCGCGTC TCGAGGAGCG CCTGGGCAAT CGCAGCGCCG CGGCCCAGGC GCGCGCCCTG
GCGGCGGAAC TCGACGCGCT GTCCGAAGCC GTACGCGAGC CCTGA
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| Protein sequence | MRRRDLVALL AIALSLSLSL AALGGVPRWA ACTGAALGLA CALPYLGARR RIDARAPLVL
AAGFAALATA VQCLPLPAGL VAWLSPARHA ASAEVARLLG EPLPGFLALS HEPAATLVHL
ASAAGLLALA YAAVRVAGRR SGALWLMRIA AGCGAAMALC ALIHGFFGVD ALFGVYRPSQ
ATPAFPAPLL NDNHLAGFLS LCAPLALALA VARPGAERAG WLLAVLAIAA TNLLVASRIG
ALSLCAGLLV AGALLVAEAQ RRPGRRIERA VLIPGAIIAA CAAVLVVSSA GARVGQELAE
TTRAELDDPR SKFQVWQRSI DLVSEHLWTG VGSGGFEPTF TRLDGTSIKT YSHLENAYLQ
ILVDFGAPLA AGFAILGLWL ALAALQRRRQ DPLCAGALAG CTATAVHACG DFHLALPGVA
ATLVIVLAVL VPARLRSPAP RRRVLTPRIA GLLLGAGAVA LAASPLGQGA RAAEDRVRAE
LDRSSELRAR GEREGAAAAE TRALRIGRAQ VARHPSDYLL AGLLAEAHFR RRDPASVAWI
NRALQLNPSH AGLHVLAARM LLTAGHRDQA LLEYAAALRH TLTPRPLLGD LVRWFADPSE
AARGIPASRE RLPILSSWLL AMERGDVALA YARRVYAEHA DDHEVQRVVA DLAWRQGDHV
LARSAAEPAY AATGALAEAL ILGQALHAQG REDEAARVLV EAIAARRYDE LWQLTRAHQV
LAEVEDARGD PLAARTHLRT AIRLAPAHAG PAVRADLQRR LARLEERLGN RSAAAQARAL
AAELDALSEA VREP
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