Gene Hoch_5672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5672 
Symbol 
ID8548086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7786061 
End bp7786837 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content73% 
IMG OID646390340 
ProductFHA domain containing protein 
Protein accessionYP_003270042 
Protein GI262198833 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0631654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAC CAAGACGACC GCGCCGCGCG CGCTCCACGC GACCCAATCC CCCCGGCGAC 
CAACCCGCCG GCCACGCCCG CGAGTCCGCG GGTGCCCGCG AGTCCGCGGG TGTCCGCGAG
TCCGCGGGTG CCCGCGAGCC CGCGGGTGTC CGCGAGTCCG CGGGTGTCCG CAGTCGCGCG
GGCGGCGAAA TCGGACACTC GTCCGCGGCT CCGGAAAGCC GACGCACGCT CGCGCTCGAC
AGCGCCATCG ACGTCCCCGG CGTCGGCAAT CCCGCCCATC TCCCCGTCCA CGGCCTGCGC
GTGCTGCCCT ACGGACCGAC CTTCGACTTC GACATCTTCC GCGCTGGCGA GCGGCCCAAG
CCGGTGCTGT CGCTGGGCGC TGGGCCGAGC TGCGACATCC GCATCGACGA CGCCGCGGTG
TCGGGCCTGC ACTGCGTGAT CGAGCGCCGC GGCGCGTACA CCTTGCTGCG CGACTGCGAG
AGCACCAACG GCACCCAGCT CAACCGCGCG ATGTCGTACG AGGCCGAGCT GCGGCCCGGC
GACCTCTTGA CCGTGGGCCG CACCAACCTG GTGGCCTACG GTGCCGACGC CGACGCCGCC
ATCACCTTGC CGGCCACCAA CCTCAGCGAG TTCTTGCGCG AGGCCGTGAC CCTGCACGGC
TCGCTGCGCA ACACCGCTCA GGCCATCGGC CTGCCGTACT CGACCCTGCG CGGCTGGCTG
AGCAAGCGCG TGTTCGCGGC GCCCGCGCGA CCGCGTCGGC GTCGTGGCGA CGACTAG
 
Protein sequence
MSKPRRPRRA RSTRPNPPGD QPAGHARESA GARESAGVRE SAGAREPAGV RESAGVRSRA 
GGEIGHSSAA PESRRTLALD SAIDVPGVGN PAHLPVHGLR VLPYGPTFDF DIFRAGERPK
PVLSLGAGPS CDIRIDDAAV SGLHCVIERR GAYTLLRDCE STNGTQLNRA MSYEAELRPG
DLLTVGRTNL VAYGADADAA ITLPATNLSE FLREAVTLHG SLRNTAQAIG LPYSTLRGWL
SKRVFAAPAR PRRRRGDD