| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5658 |
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| Symbol | |
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| ID | 8548072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7764295 |
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| End bp | 7766103 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646390326 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_003270028 |
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| Protein GI | 262198819 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.525886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.309242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGATC GATTGCGCGA ACTCGAAGCC CAGCTTCGCA ACGAGCACAA GAAGTCGGCG
CTCGTGCGCG AGGTGTGGCG CGCGATGTCC TCGGGCCAGG AGCTGGACCA GCTGCTGACG
CTGATCATGG ACAAGGTCAC CCAGCTCATG GAGGCCGACC GTTCCACGCT CTACGTGCTC
TCGGACGACG GCGAGACGCT GTGGTCGAAG GTGTTGCAGG GCGACGAGTT CTCGGAGATC
CGGCTCAAGG TCGGAGAGGG CATCGCGGGC TGGGCGGCGG CCTCGGGCGA GCTGGTCAAC
ATCCCCGACG CGTACTCGGA CGAGCGCTTT CAGCCGGCCG TGGACATCAA GTCGGGCTAC
CGCACGCGCT CGATCCTGTG CGCGCCCATG CGCAACAGCA AGAGCGAGAT CGTCGGCGTG
TTGCAGGTGC TCAACAAACA GGCCGGCGGA CCGTTCACGG TCGACGACGC CGAGCTGCTC
ACGGCGCTGG CCAGCCAGGC CGGCCTGTCG GTCGAGAACT CCAAGCTGTA TCACTCGGTG
GTGGCCAAGA ACGCCGAGCT GATGAAGGCG CGCGATCAGC TCGAGCAGCG CAGCCACGAG
CTCAACGTGC TCTACGAGAT CGAGAAGCTG ATGAACGCCG ACCTGGGCCT GGGTCAGCTC
CTCGAGAACG TGCTCGCCGA GGCCATGCAG ACCGTGGGCG CCAAGGCCGG CACCATCGCC
CTGCGCGACA CCGAGGCCGA GAACTCGAAC GTGCTCGAGT TCCTCACCTT CGCCGGGCCT
GTGGCCACCG AGCTCGAGCA CCGCACGCTG CCCATGGGCG AGGGCGTGCT GGGCTGGTCG
GTGGCTCACG ATCAGCCCGT GATCGTCAAC GATCCCCGCG CCGACGAGCG CCACGCCAGC
GCCTTTGCCG AGGAGCTGGG GTTCATGCCC GCGCACCTGG TGTGCGCGCC GCTGCGCAGC
GGCGACGAGG TGCTGGGCGG CATCGAGCTG ATCGACAAGG TGAGCCGCGA CAGCGACGCG
GACGCCGCCG GCTTCAGCGA AGAGGACCTC AAGCTGGTGG TGCTCATCGC CGGGCAGGCG
GCCAAGGCCA TCAGCCTGGC GCGCAGCCGC AGCGCGCGCA GCAAGCAGGA GCGCCTGGCC
TCGATCGGGC GCATGCTGGC CAGCGTGCTG CACGACCTCA AGACGCCGAT GACCATCATC
TCGGGCTACG CGCAGCTCAT GGCCCAGATC GACGACGCCG ACCAGCGCGA GGCCTACGTC
GAGCAGATCC TGCGGCAGTT CGATCTGATG AAGGGCATGA CCCAAGAGGT GCTGCTGTTC
GCGCGCGGCG AGAGCGAGCT GCTCGTGCGG CGCATCTTCG TCAACAAGTT CATGGACGAG
CTGCTCACCC AGCTCAACCA CGCGCTCGCC GGTCGCAATA TCAAGCTCAC CATCGACCCC
GAGTATCGCG ACACCGCACA CTTCGACGAG CAGAAGATCC TGCGCGTCAT GCACAACCTG
GCGCGCAATG CGGCCGACGC CATGCCCGAG GGCGGCTCGC TGGCGATCCG CACCAAGACC
AAAGACGGCT CGCTGGTGTT CGAGGTCGAG GACTCGGGCG GCGGCATTCC GCCCGAGCTC
GACGGTCGCC TGTTCGATCT GTTCTCCTCG GGCAAGCAGG GCGGCACCGG CCTGGGTCTG
GCCATCGTCA AGAAGATCAT CGAAGAGCAC GGCGGCGACA TCACGTATCG CTCGGTGCAG
GGGCAGGGGA CCTGCTTCAC CATCCGGCTG CCCATGGTGC GGCAGGAGAG CCCGCCCGAC
TTCCCGTGA
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| Protein sequence | MSDRLRELEA QLRNEHKKSA LVREVWRAMS SGQELDQLLT LIMDKVTQLM EADRSTLYVL
SDDGETLWSK VLQGDEFSEI RLKVGEGIAG WAAASGELVN IPDAYSDERF QPAVDIKSGY
RTRSILCAPM RNSKSEIVGV LQVLNKQAGG PFTVDDAELL TALASQAGLS VENSKLYHSV
VAKNAELMKA RDQLEQRSHE LNVLYEIEKL MNADLGLGQL LENVLAEAMQ TVGAKAGTIA
LRDTEAENSN VLEFLTFAGP VATELEHRTL PMGEGVLGWS VAHDQPVIVN DPRADERHAS
AFAEELGFMP AHLVCAPLRS GDEVLGGIEL IDKVSRDSDA DAAGFSEEDL KLVVLIAGQA
AKAISLARSR SARSKQERLA SIGRMLASVL HDLKTPMTII SGYAQLMAQI DDADQREAYV
EQILRQFDLM KGMTQEVLLF ARGESELLVR RIFVNKFMDE LLTQLNHALA GRNIKLTIDP
EYRDTAHFDE QKILRVMHNL ARNAADAMPE GGSLAIRTKT KDGSLVFEVE DSGGGIPPEL
DGRLFDLFSS GKQGGTGLGL AIVKKIIEEH GGDITYRSVQ GQGTCFTIRL PMVRQESPPD
FP
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