Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5645 |
Symbol | |
ID | 8548059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7749451 |
End bp | 7750173 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646390313 |
Product | putative transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003270015 |
Protein GI | 262198806 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATTC CTGTGCACCA CACGATCGAG AACTACGCCG CGGGCTCGGT GATCTTCCAA CAGGGCGAGA CAGCGCACGC GCTGTACGTC GTCGAGAGCG GCGCGGTCGA GCTGCGCCGG CAGGTCCACG TCGATGAGCA CGTGTTGGCG GTGCTGACCG CCGGCGAGTT CTTCGGCGAG ATGGGGCTGC TCAACCAGCG CACGCGCTCG GCCACCGCCG TGGTGCGTCG CGACGCTCGT GTGCGCGTGA TCACGGCCGA GGACTTCCGC GCGTTCTTGG GGCAGCAGGA TTCGTTCCTC ACCCAGATGC TGGGCACCCT GGCCAGCCGT CTGGACCAGG CCAACTACCA GACCGAGATC TTCATGTACG AGCATCCGGA CAACCGGATG GTGCAGAGCC TGTGTCACGC CATCGATGAG CAGGTGCAGC GCGGTGAGGG CGGTCGCGGG GCGGTGCATG TGCCGCTCAC GCTGCGCGAG CTGGCGGCGC GCGCCTCGGT GAGCCTGGAC GAGACTGTGG ACGTCATCGA GCGCCTGGCC AACGACGGCC TGATCATCCC CGCGTGCGCG GCCGACATCG ACGACCGCGG CTACGTGGTC GCCGAGTCCG AACTGCTGGT CCAGTACCTC GATAAAGCCA CGAGCAAGCA GCATCAGCGG GCTGGCACCT GGGTGGGCGC GGGCGCGTCC ACCGCCGCCA GCTACCGCAG CGACATGAAC TGA
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Protein sequence | MNIPVHHTIE NYAAGSVIFQ QGETAHALYV VESGAVELRR QVHVDEHVLA VLTAGEFFGE MGLLNQRTRS ATAVVRRDAR VRVITAEDFR AFLGQQDSFL TQMLGTLASR LDQANYQTEI FMYEHPDNRM VQSLCHAIDE QVQRGEGGRG AVHVPLTLRE LAARASVSLD ETVDVIERLA NDGLIIPACA ADIDDRGYVV AESELLVQYL DKATSKQHQR AGTWVGAGAS TAASYRSDMN
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