| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5638 |
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| Symbol | |
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| ID | 8548052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7740365 |
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| End bp | 7741987 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646390306 |
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| Product | histidine kinase |
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| Protein accession | YP_003270008 |
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| Protein GI | 262198799 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACA CCCACGAGGT CTTGGCGCTA GCGGACAAGG CACGTGCATC GGACGATATC
GACGCCTACG TACGAGCGTC CGGCCACAGC TTGGCGGCCG TGGTCCACTC GCTCGACGAT
GTGCGTGCGC GTCTGGGTTT GGAGGCGCTC AGCGGCGAGG ATCCCGCGGT CCTGATCGTC
GAGGCGGGAG CCTGGGACGA GCGCGCTGGC TTCGCCGACG CGTTGGTGTC CTTGGCGCGT
GAGGAGGGCG TCCCCGTGGT CTGGTTGCAG GACGACGGGC ACGAGGCCCC CGAGGCATTT
GCCCACAGCG AGGTGGTCGT CGCGAGCTCG GCGCCGCGCG AGCTGGGGCT GGCGGTATCG
CTGGCCATGG CGCAGTGGAG CGCCGGCCGC GCGCAGCGCA CCAGCCGCGA GCTGGGCGAG
GCTCTGCGCC AGAGCGAGGG CCGCTACGAG TCGCTGTTTC ACGACGCGCC GGTGTTCTTC
TGGGAAGAGG ACGTGTCGGC CGTGGATCGC CACCTGGCCG CGCTGCGCGC CGAGGGCGTC
ACCGACATCG CCGCCTACGC CAAGGAGAAT CCCGAGGCGG TGATGGGCTG GGTGTTGCAA
AACGAAGTCG TCAACGTCAA CGAGGCCGCG CTGCGCGAGT TCGGCACCGA CAGCGTCGAG
GACCACCGCG ACAGCGTCGG CGAGACGCTG ATGCCCGACA TATTCCCGCA GATCATCGCG
GCCGTGGTCG CCTACGCCGA GGGCAAGCTG TACTGGCAAT TCGAGGGCCG ATACCGCAAC
AAGAAGACCG GCGTGCCCTT CGTCGCGCTG TGCCGCTTCG TATTTCCGCG TCCGGGCATG
ACCTCGCGGC GCATGATCAT GTGCGGCATC GATATCACCG AGCGCAAACG CTCCGAAGAG
GAGATCAGCG AGCTCAACCG GGCGCTGTCG GAGCGCGCGC ACGAACTCGA GGCCATCAAC
CACGAGCTCG AGGCGTTCAG CTACTCGGTG TCGCACGATC TGCGGGCGCC GCTGCGCGCG
ATCGAGGGCT TCAGCCGGCT GCTCTTCGAC CGCTATCACG ATCAGCTCGA CGAGCGCGGC
CAGAATTACC TCACGCGTGT GCGCGAGGCC GGTCAGCGCA TGAACCTGCT GATCGAGGAC
CTGCTCAAGC TGTCGCGCAT GTCGCGCAGC GAGATGCACC TCGAATCCTG CGACCTCAGC
GCCATGGCCG AAGAGACCAT CAGCAACCTG CGGCAAATTT CACCGGAGCG CGAGGTCGAG
GTGCTCATCG CGCCCGAGGT GCGCGCCAAG GGCGACCCGA CGCTGCTGCG CGCGGTGCTC
GAGAATCTGC TCGGCAACGC CTGGAAATTC TCGGCCAAGC GCGAACACGC GCGCATCGAG
TTCGGCGTCA CGATGGAAAG CGGACGGGTG TCCTATTTCG TACGCGACAA CGGCGCTGGC
TTTGATATGG CGTATCTCGG CAAACTATTC AACGCGTTTC AACGCCTGCA CACGGCCACC
GAGTTCGAGG GCACGGGCAT CGGCCTGGCT ACGGTGCAGC GCATCGTGCG TCGCCACGGC
GGCGAGGTCT GGGCCAAGGG CGAGATCGAC GTGGGCGCGA CCTTCGGCTT CTCGCTCGGC
TGA
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| Protein sequence | MTNTHEVLAL ADKARASDDI DAYVRASGHS LAAVVHSLDD VRARLGLEAL SGEDPAVLIV
EAGAWDERAG FADALVSLAR EEGVPVVWLQ DDGHEAPEAF AHSEVVVASS APRELGLAVS
LAMAQWSAGR AQRTSRELGE ALRQSEGRYE SLFHDAPVFF WEEDVSAVDR HLAALRAEGV
TDIAAYAKEN PEAVMGWVLQ NEVVNVNEAA LREFGTDSVE DHRDSVGETL MPDIFPQIIA
AVVAYAEGKL YWQFEGRYRN KKTGVPFVAL CRFVFPRPGM TSRRMIMCGI DITERKRSEE
EISELNRALS ERAHELEAIN HELEAFSYSV SHDLRAPLRA IEGFSRLLFD RYHDQLDERG
QNYLTRVREA GQRMNLLIED LLKLSRMSRS EMHLESCDLS AMAEETISNL RQISPEREVE
VLIAPEVRAK GDPTLLRAVL ENLLGNAWKF SAKREHARIE FGVTMESGRV SYFVRDNGAG
FDMAYLGKLF NAFQRLHTAT EFEGTGIGLA TVQRIVRRHG GEVWAKGEID VGATFGFSLG
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