Gene Hoch_5557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5557 
Symbol 
ID8547971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7626129 
End bp7627025 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID646390230 
ProductFHA domain containing protein 
Protein accessionYP_003269932 
Protein GI262198723 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGCG CCATCCGTAC GGATGACGCC ATGGTGTCGC GGCATCATGC GCGCCTGTTC 
GGGGCCAATG GCCAGTTCTT CGTCGAGGAT CTAGGCAGCG CTAACGGCGT GTACTTTCAG
GAGCAGCGGG TCACCCGCCA CATGCTCAAC CACGGCGACG CCGTGCGCTG CGGCAGCCTG
TGGTTGCGCT TCGTGGCTCC CGAGCTGGCC GCGGCCACGC CACAAGCGCA GCCGGATCAC
GCCGCCAGCC AGATGCCCTT CCCCGAACCC TCGGGACCGC AGCCGGTGGG CTCGCCGCGC
GGCGAGACCT CGTCGGGCCA CGTCGCCGGC TACAGCGATG GCGGCATGGG CGAGACCGGC
CCGTACGCGG CCAGCGGCGC GGGCGCGCCC GGGGCTCCGG CGATGTCACC GGGCTCGGGT
CCGGCCGCGG CGCCGGTGGC GCTCGGCGCC GAGGCCAACG AGGAGATCGG CCGCCTCAAC
CGCCGCATCG AGCAGCTCCA GACCGCCCTG CGCCTGTACC AGCGCGGCCG CGGCGAGGAG
ATCGCCAAGC GCATCGACGA GCTCGAGGAG CGCAACGAGA AGGTCCGCAA GGAGCGCGAC
GATCTCAAGC GGCGCGTCGA CGAGCTCGAG AACATGCTGC AGATCGAGGG CAGCGACGCC
AAGAGTCAGC GCGCCCGCGC GCTGATGACG CGCACCTCCG AGCTGGTCCA GCAGATTCAC
GACCTGCTCC AGGACGTGCG CATCAACGTC ATGACCTCCG AGGGCGAGTT CGAGCAGTTC
GCCGGGCAGT TGCCGCGGGC CTCCTTCGAG CTCATCCGCG AGTCGCTGCG CTCGTCGTCG
AGCCAGGTCG ATCTCATCCG CGATCTGCTG CGCGAGCTGC GCAACCTGGC CGAGTAG
 
Protein sequence
MDCAIRTDDA MVSRHHARLF GANGQFFVED LGSANGVYFQ EQRVTRHMLN HGDAVRCGSL 
WLRFVAPELA AATPQAQPDH AASQMPFPEP SGPQPVGSPR GETSSGHVAG YSDGGMGETG
PYAASGAGAP GAPAMSPGSG PAAAPVALGA EANEEIGRLN RRIEQLQTAL RLYQRGRGEE
IAKRIDELEE RNEKVRKERD DLKRRVDELE NMLQIEGSDA KSQRARALMT RTSELVQQIH
DLLQDVRINV MTSEGEFEQF AGQLPRASFE LIRESLRSSS SQVDLIRDLL RELRNLAE