| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5545 |
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| Symbol | |
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| ID | 8547959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7606624 |
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| End bp | 7607649 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646390219 |
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| Product | TrkA-N domain protein |
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| Protein accession | YP_003269921 |
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| Protein GI | 262198712 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.789205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCT TCTACCCGAT GCCCTCGGGC TCGCCGGGCA AGCGGGTGGG ACTGGCCGTA
TCGGTGCTGG CGGTGCTGAC CATCGTCGGC ACCAGCGGAT TCATGTTCAT CGAAGACCTC
GACCTGCTCG AGGGCCTGTA CATGACCGTC ACCACCCTGT CGACCGTCGG CTACGGCGAG
GTGCACCCGT TCTCGCCGGC GGGTCGCGGC TTCGCCACCG GGCTCATCGT ATTCGGCCTG
GGCACGGCGC TGTACACGGT CGGCGCAGTC GGCGAGTATT TCATCGAGGG CCGCCTCGGC
GGCCTGCTCC ACCAACGCGC CATGAACCGC ACCCTCGACC AACTCGAACA GCACGTCATC
CTGTGCGGCT TCGGACGCCT GGGCCACGTC GTCGCCGACG AGCTCTTGCG CTCCGGCGCC
CAGCTCGTGG TCATCGACAG CGACCCCGAG CTCGAGCCCA CGCTGATGAC CAAAGGGCTG
CCCTACCTCA TCGACTCCGC GCTCGAAGAG GAGGCGCTCA CCCGCGCCGG TATCGCGCGC
GCACGCGCCA TCGTCATCAC CACGCCGACT GACGCCGACA GCGTGTTCGT CACCCTGTCG
GCGCGCCAGC TCAACCCCGA GCTGGTGATC TACGCCCGCG CCGAGTCCGA GACCGGCGCG
CGCCGCCTGC GCCTGGCCGG CGCCCACCAG GTCATCCAGC CGCACCTCAT CGGCGGCCAG
CGCATCGCCA ACGCCCTGCT GCGGCCCGCC GTGGTCGACT TCATCGAGCT GTCCTCGCCC
GGCAGCGGCC CGGAGATCGA CATGGAAGAG CTGGTCGTGG GCCCGGGCTC CATGCTCGAC
GGCCACGGCG TCGAGGCGCT GTCCTTTGCC AACATCGAGG CCGTGGTGGT CGCCGTGCAG
CGCCCGGGCG AGCCCATGCG GGTGTCGCCG AGCACCAATC AGCGCTACCG GGCCGGCGAC
CGCGTGGTCG TGGTCGGCGA GCGCGCCGAG CTGCGCCGCC TGGCCACGCG CGCCCAGGGC
TCGTAG
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| Protein sequence | MPIFYPMPSG SPGKRVGLAV SVLAVLTIVG TSGFMFIEDL DLLEGLYMTV TTLSTVGYGE
VHPFSPAGRG FATGLIVFGL GTALYTVGAV GEYFIEGRLG GLLHQRAMNR TLDQLEQHVI
LCGFGRLGHV VADELLRSGA QLVVIDSDPE LEPTLMTKGL PYLIDSALEE EALTRAGIAR
ARAIVITTPT DADSVFVTLS ARQLNPELVI YARAESETGA RRLRLAGAHQ VIQPHLIGGQ
RIANALLRPA VVDFIELSSP GSGPEIDMEE LVVGPGSMLD GHGVEALSFA NIEAVVVAVQ
RPGEPMRVSP STNQRYRAGD RVVVVGERAE LRRLATRAQG S
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