| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5507 |
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| Symbol | |
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| ID | 8547920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7552099 |
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| End bp | 7552956 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646390180 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003269883 |
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| Protein GI | 262198674 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.389941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCG CGCGCACATC GCTGCTGGCG CGGCTGCGGC TGTCGCCGAG CGCCTACGTC
GGCATGGCGC TGCTCACCGG CTTCGTGCTG GCCGGGCTGC TGGGGCCGCT GCTGGCACCC
TACCCGCCCG AGATCATGAA CCTCGAGAAC GAGTTTCTGC CGCCCTCGGC CGCGCACTGG
CTGGGCACCG ACCAGCACGG CAACGACGTG CTCTCGCAGA TGCTGCACGG CGCCCGCCTG
GCGCTCCTGG TCAGCGTCAG CGTGGTGTCG ATGAGCGCCA CCATCGGCGT ACTCCTCGGG
GTCATCGCCG GGTATTTCGG CGGCCGGGTC GACGAGCTCA TCATGCGCGT TGTCGACATC
CTCATGGCAT TCCCCGGCAT CCTGCTCAAC ATCGCCATCG TCGCCACCGT GGCCACGCCC
GGCATCGGCG TGCTGATCTT CGCGCTGGTG CTCAACGGCT GGGTCGGCTA TGCGCGCGTC
GCCCGCGGCC AGGTGCTCAG CCTGCGCGAG CGCGAGTACG TGCTCGCCGC CCGCTGCCTG
GGCGCGCGGC CGTGGCGCAT CATGCGCAAG CACATCATCC CCAACCTGAT GTCGCCGATC
ATGGTGCAGA TGACCTTCGG CTTCGGCGGC GTCATCCTGG TCGAGGCCTC GCTGTCCTTC
CTCGGCCTGG GGCCGCAGGT CGAGTACACC TGGGGCGCGC TGCTCGACCA GGGCACGACC
TTCCTGTGGC GGCCGGGCGC CGAGTTCTTC GCCTTCATCC CCGGCGCCGC CATCATGGGC
GTGGTGCTCG GCGCCAACCT GCTCGGCGAC GGCCTGCGCG ACCGCTTCGA CCCCAAACAC
CAGGCGCGGC GCGGATGA
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| Protein sequence | MSRARTSLLA RLRLSPSAYV GMALLTGFVL AGLLGPLLAP YPPEIMNLEN EFLPPSAAHW
LGTDQHGNDV LSQMLHGARL ALLVSVSVVS MSATIGVLLG VIAGYFGGRV DELIMRVVDI
LMAFPGILLN IAIVATVATP GIGVLIFALV LNGWVGYARV ARGQVLSLRE REYVLAARCL
GARPWRIMRK HIIPNLMSPI MVQMTFGFGG VILVEASLSF LGLGPQVEYT WGALLDQGTT
FLWRPGAEFF AFIPGAAIMG VVLGANLLGD GLRDRFDPKH QARRG
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