| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5506 |
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| Symbol | |
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| ID | 8547919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7551164 |
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| End bp | 7552102 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646390179 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003269882 |
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| Protein GI | 262198673 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.409257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCG GTTCGTTTCT GGTGCGCCGG CTGGGCCTCG GGCTCATCGC CATGTTCGGC
GTCTCGGTGC TGGTGTTTCT GTTCCTGCAC CTGATCCCGG GCGATCCCGT CGACCAGCTC
GCGGGCGGCG ACGCCGAGCC CGAGCAGCGC CAAGCCATCG CCGAGTGCCT GCACCTCGAC
GAGCCCAAGC TGGTGCAGTT CGGCATCTTC CTCGGCAACA TCGGCAACGG CACCCTGGGC
CAGCAGTGCC CCAACCCCGA ATCCCGGCCC ACGGTCATGG ACCGCGTCAT CGAGGTCATG
CCCTACACCA TCGAGCTGGC CGCGGCCGGC ATGCTGGTGG CCGTGCTGCT GGCGCTGCCC
CTGGGCGTGG CCGCGGCCGT GCGCCGGGGC ACCTGGGTGG ACACCCTGAG CGCCTTCGTG
TCGCTGTCGG GTATCTCCAT CCCGACCATG CTGATGGGGC CGCTGTTCAT CCTGGTGTTC
TTCATCTACC TGGGCTGGCT GCCGGGCCCG GCCGAGTCGG ATCAGCCCTT TGCCCTGGTG
CTGCCCGCGA TCGTGGTCGG CACCCACCTC ATGGCCATGC TCTCGCGCAT GACCCGCTCC
TCGCTGGTCG ACGTGCTCGG CGAGGACTAC ATGACCACGG CCCGCGCCAA GGGCCTGCCG
CCGCTCATCG TGCTGCTCAA GCACGGCCTG CGCAACGCGC TGCTGCCGGT CATCACCATC
GCCGGCCTGC AGTTCGGCGC CATGCTCAGC GGCGCCATCA TCACCGAAAA AATCTTCGCC
CGACCCGGCC TCGGCACGTT GCTGCTCGAC GGCATCAACG AGCGCAACTA TCCGGTGGTG
CAAGGCACCG TGCTGGTCAT CGCCGTCATC TACGTGAGCG TCAACATCCT GGTCGATCTC
GCCTACGGCC TGGCCGACCC GAGGATCCGC CGGGCATGA
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| Protein sequence | MSIGSFLVRR LGLGLIAMFG VSVLVFLFLH LIPGDPVDQL AGGDAEPEQR QAIAECLHLD
EPKLVQFGIF LGNIGNGTLG QQCPNPESRP TVMDRVIEVM PYTIELAAAG MLVAVLLALP
LGVAAAVRRG TWVDTLSAFV SLSGISIPTM LMGPLFILVF FIYLGWLPGP AESDQPFALV
LPAIVVGTHL MAMLSRMTRS SLVDVLGEDY MTTARAKGLP PLIVLLKHGL RNALLPVITI
AGLQFGAMLS GAIITEKIFA RPGLGTLLLD GINERNYPVV QGTVLVIAVI YVSVNILVDL
AYGLADPRIR RA
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