Gene Hoch_5494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5494 
Symbol 
ID8547907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7537697 
End bp7538353 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content72% 
IMG OID646390167 
Productpeptidase M14 carboxypeptidase A 
Protein accessionYP_003269870 
Protein GI262198661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.136631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.114762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGCC AGGTCGAGAT CGGCGAGACC GTGGTGGGGC GCGGCATCAT GGCCCTGCAC 
TTCACCCCGC CCGAGTACGC GCGCCCGCGC CCGCCGGCCG TGTTCATCGG CGCCATCCAC
GGCGACGAGC CGCTCGGCAG CTACTGCCTG GCGCGGCTGT GCGACGATCT GCTGGAGCGG
CCGCCAGGGC GCGATACCTG GATCATTCCC GCGCTCAACG TCGACGGTCT GGCGGGCGGC
ACCAAGAACA ACGCCAACGA CGTCGACCTC GACCGCAACT TCGCGGCCGC GAGCTGGAGC
GCGAGCCACA GGCCCGGCTA CGGCTCCGGC GCGGCGCCCG AGTCGGAGCC CGAGACCCAG
GCGCTGGTGG CCCTGATCGC GCGCGTGCAG CCGGCCCGCA TCGTCACCGT GCGCTCGCCG
TATCGCATGG TGCTGTGGGA CGGCGCGGGC GAGGCGCTGG CCGCGGCGAT GGCCGAGCGC
AACGGCTACG AGCTGCGCGA CGACCCGGGC TATCCGCGAC CCGGCTCGCT GGCGCACAAG
TACGGGGTCG AGGCCGGCTG CGAAGTCGTG ACCCTGGAAG TGCCGTTCTG CGAGGAGCCG
GAGGCGTGGC GGGAAAATCG CTCGGCCCTG CGCTTTGCCG TCGATCTTCC CGTGTGA
 
Protein sequence
MYRQVEIGET VVGRGIMALH FTPPEYARPR PPAVFIGAIH GDEPLGSYCL ARLCDDLLER 
PPGRDTWIIP ALNVDGLAGG TKNNANDVDL DRNFAAASWS ASHRPGYGSG AAPESEPETQ
ALVALIARVQ PARIVTVRSP YRMVLWDGAG EALAAAMAER NGYELRDDPG YPRPGSLAHK
YGVEAGCEVV TLEVPFCEEP EAWRENRSAL RFAVDLPV