Gene Hoch_5418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5418 
Symbol 
ID8547830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7443219 
End bp7444754 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content70% 
IMG OID646390091 
Producthypothetical protein 
Protein accessionYP_003269795 
Protein GI262198586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.119869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACA CGAGCAGCGT CGGCCGGCCT CGCCGACCCT CGCCCCGTCC CCCAGCAACT 
CCTGCCGAGC GTCGCCGCGC GCGTTTGCTC GGACACCTGG TCGCACTACT CGCGCTCACA
GCCGCGAGCT CGGCCCTGGC CATGCCCGCC GCGCCCGCGC TGGTGTGCGA GAGCTACCCG
AGCTCGGCCC TGTGCACGGG CCAGCTCCCG GCGTGCACCC TGTGCCACAC CACGCCGCCC
GTGCGCAACG CCTTTGGCGC CGAGCTCGAG GCAGCGCTCG CGCCGGGCGA GTCGCGCCCG
CTCACGGCCG AGGCCTTTGC CGCCGCGCTG CCCGACGCGC TCGCGGCCGT GGAGAGCGGC
GACACCGACG ACGACGGTTT CACCAACCTC GACGAGCTGC TGGTCGGCAC CGCGCTCGAC
GACGCCGACA GCAAGCCGTC TGCCGGCGAC GGCCTGGTGT GCGAGGACCC CAAAGAGAGC
TGGGCCTTCG ACGTCTGCGA TCGCGACCCC GCGTACACCT TCGCCAAGGT CTTGCGCGAC
ACCTGCGGCC GCTCGCCCAC GCTGGCGGAG ATCGACGAGC TGTACGCCTT CGCCGACCCC
TGGCAACACA TCCACGCCAC CCTCGACACC TGCGTGCAGA GCGAGTACTG GCAGGGCAAA
GACGGCGTGC TGTGGCAGCT CGCCCACCGC AAGATCCAGC CCTCGGCGTC GATCAAAGCC
GGCGAGAACG CCGGCGTGGT GCCGCTCGCC GACTACTTCG ACGACTACAA CCTGTTCGTC
TACACCCAGA CCGGCGACCG CGACGCGCGC GAGCTGCTCA CCGCCCAGTA CATGGTCGAG
CGCAGCGACA GCCCGTCCAC GAGCTACCAG CCCTACACCC GCACCGTGCT CCAGGACGTG
GCCGCGCGCG GCACCGGCGT GGCCCAGCTC GTCGCCCCCG AACGCCGCGC CGGCATGATC
ACCACGCGCT GGTTCCTGAT GACCAAGACC ATGTTCACCC AGGTGCCGCG CACCTCGGCC
GCGCAGGCCT ACCGCGCCTA CCTGGGCATG GACATCGCCA AGCTCGAGGG CCTCAAGCCG
GTGAGCGCCG AACCCATCGA TTACGACGCC AAAGGCGTGG CCCAGACCGA GTGCGCCGGC
TGTCACTCGA CCCTCGACCC GCTCACCTAC CCGTTCACCC GCTACGAGGG CCTGGGCGCC
GGCAACGGCG CCATCCCGGC CTCGTACAAC CCCGAGCGCA TGGAGCGCTT CGTCAGCGAC
GCCACCCCCG ACATCGGCGA CACCCCCGAG GCCGGGGTGG TTCTCGGACA AGAGGTCTCC
AACCTGCTCG AGTGGGCCGA GGTCGCCGCC AACAGCGACG AGTTCGCCCG CGCCACCGTG
CTCGACTACT GGAAGCTCCT GGTCGGCGTC GAGCCCGGCC CCAGCGACAA CGACCGCTTC
ACCGCCCTGT GGCAGGCCTT CACCAGCACC CACGACTATC GCATCAACCG CATGCTCCAC
GAGCTCATCG AAACGGAGGC CTACAGTGTT CCGTAA
 
Protein sequence
MHDTSSVGRP RRPSPRPPAT PAERRRARLL GHLVALLALT AASSALAMPA APALVCESYP 
SSALCTGQLP ACTLCHTTPP VRNAFGAELE AALAPGESRP LTAEAFAAAL PDALAAVESG
DTDDDGFTNL DELLVGTALD DADSKPSAGD GLVCEDPKES WAFDVCDRDP AYTFAKVLRD
TCGRSPTLAE IDELYAFADP WQHIHATLDT CVQSEYWQGK DGVLWQLAHR KIQPSASIKA
GENAGVVPLA DYFDDYNLFV YTQTGDRDAR ELLTAQYMVE RSDSPSTSYQ PYTRTVLQDV
AARGTGVAQL VAPERRAGMI TTRWFLMTKT MFTQVPRTSA AQAYRAYLGM DIAKLEGLKP
VSAEPIDYDA KGVAQTECAG CHSTLDPLTY PFTRYEGLGA GNGAIPASYN PERMERFVSD
ATPDIGDTPE AGVVLGQEVS NLLEWAEVAA NSDEFARATV LDYWKLLVGV EPGPSDNDRF
TALWQAFTST HDYRINRMLH ELIETEAYSV P