| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5417 |
|---|
| Symbol | |
|---|
| ID | 8547829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7441672 |
|---|
| End bp | 7442931 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646390090 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_003269794 |
|---|
| Protein GI | 262198585 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0631] Serine/threonine protein phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0881735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0681678 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTGCC AGGCCTACGG TAAGACGGAT GTGGGGCGCA CCCGCAGCCA GAACGAAGAC
TTTTTCCTGA TCGATGACCA GCTCGGCTTC TACATCGTGT GCGATGGGAT GGGTGGTCAC
GCGTCGGGCG AAGTCGCCAG CGAACTGACC GCGAGCACCA TCGCCGATGA GCTGCGCGAG
CACGCCGCGC TGCTGCAGCG CTACGCCTTC GATCCCTCGC TCGAGCTGCG CCGGCGCATG
CGCGAAGTCC TCGACGGCGC TGTCCAGAGA GCGTGTCGCG AAGTGTGGAC CCAGGGCAGC
GCCCAGCAGG GCGCCGACGC CGAGCGCGGC ATGGGCACCA CGCTGTCGAT GCTGGTCGTG
TGCGGTCGCT TTGCCTTTGT CGTCCACGTG GGCGACAGCC GCATCTACCT GGTGCGCGGC
GGCGCCATGC ACCAGCTCAC CGAGGACCAC AGCCTGGTCA ACGAGATGCT CAAGAAGGGC
CTGATCGCCG ACGACCGCGT CGAGTCCTAC CCCTTCGCCA ACTTCGTCAC CCGCGCCGTG
GGCATTCAGC CCGAGGTCGA GCCCGATATC CTGCACCTCG AGCTGATGAA CGGCGACACC
TTCTTGCTGT GTTCGGACGG GCTGACGAAA CACGCCAAGA ACAGCGAGCT GCTCGACGTC
ATCCACACCA ACGAGCTCGA CGAGCTGCCC GACGTGCTGG TGTTCATGGC CAACGAGGCC
GGTGGTGAGG ACAACATCAC GGCCGTGGTC ATCGGCGTCG GCCGCGACGC CACCACCCAG
ACCCTGCAGC ACACCGATCT GGTCGCGCGC AAGATCGAGA TGCTGGTCAA GCTGCCGCTG
TTCAGCAGCT TCGACTACAC CGAGATGGTC AAGCTGCTCG AGATCATCGA CACCCGCTCG
GTGGCCGCCC GCGACGTCAT CATCCGCGAG GGCGAGTCGG GCGACGCCAT GTACATCATG
CTCACCGGCA GCGCCGGGGT GTACAAGCAG GAGCAGCTCA TCAACGAGCT CGGGCCCAGC
GACTTCTTCG GCGAGCTGAG CCTCATCGAC GACACCCCGC GCTCGGCCAC CGTGGTCGCG
CGCGAGCCCT CGACCCTGCT CATCATCGAG CGCAAGCGGC TGTTCGCGCT GCTCGAGAAG
GCGCCCAAGA TGGCCGCGCG CCTGTACTGG TCGTTCTTGC GGCGCATGAG CATGCAGATC
CGCAACAAAG ACAACCAGCT CTACCAGCTC CGCCGCGCCA TCGAGTCCTC CGGCACCTGA
|
|---|
| Protein sequence | MRCQAYGKTD VGRTRSQNED FFLIDDQLGF YIVCDGMGGH ASGEVASELT ASTIADELRE
HAALLQRYAF DPSLELRRRM REVLDGAVQR ACREVWTQGS AQQGADAERG MGTTLSMLVV
CGRFAFVVHV GDSRIYLVRG GAMHQLTEDH SLVNEMLKKG LIADDRVESY PFANFVTRAV
GIQPEVEPDI LHLELMNGDT FLLCSDGLTK HAKNSELLDV IHTNELDELP DVLVFMANEA
GGEDNITAVV IGVGRDATTQ TLQHTDLVAR KIEMLVKLPL FSSFDYTEMV KLLEIIDTRS
VAARDVIIRE GESGDAMYIM LTGSAGVYKQ EQLINELGPS DFFGELSLID DTPRSATVVA
REPSTLLIIE RKRLFALLEK APKMAARLYW SFLRRMSMQI RNKDNQLYQL RRAIESSGT
|
|---|
| |