Gene Hoch_5416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5416 
Symbol 
ID8547828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7439636 
End bp7441387 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content71% 
IMG OID646390089 
Productserine/threonine protein kinase 
Protein accessionYP_003269793 
Protein GI262198584 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.281665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.125705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAT CACCGGTGGC CACTAAAGGA GAGAAGAGAG AGCCCGAGCT CTTCGGCCCC 
TACGAAGTCT ACGAGCGGAT TGGGGTTGGC GGGATGGCGA CTGTGCACAG GGCCAAGAAG
CAGGGCATCG AGGGCTTTAC CCGCGAGGTT GCCCTCAAGC GGATGCTTTC GCATCTCGCC
GACGACGACT CGTTCATCCA GTCGTTCGTG CGCGAGGCGC GGCTGGCCTC GCAGCTCCAG
CACGCCAACA TCATCCACAT TCACGATCTC GGTCGCGACG GCCGCGTCTA CTACATCGCG
ATGGAGTACG TGCGCGGCTG GGATCTGCGC AAGATCCTCA AGCAGACGGC CTACGCGACC
GGGCCGATGC CGCTGGCCAT GATGCTGACC ATCGCCCGCC AGCTCTGCGA CGCGCTCGAC
TACGCGCACA ATCTCGCCGA CGAGAGCGGT GAGCCGCTCG GCCTGGTGCA CCGCGACGTG
TCGCCCTCGA ACCTGCTGGT CGCCGCCGAC GGGCACCTCA AGGTCATCGA TTTCGGCATC
GCCAAGGCCA CGGCCAACTC GCTGCGCACG CTGAGCGGGC GGGTCAAAGG CAAGTTCGCG
TACATGGCGC CGGAGGCCAT CCGCGGCAAG CAGCTCGATC GCCGCACCGA TATCTTCTCG
ATGGGTATCG TGGCTCACGA GATGCTCACG GCGCGGCCGC TGTTCGCGAC CAAGAACCAG
TTCGACACCA TCCGCCGCAT CACCCAGGAC GAGGTCTCGC CGCCCTCGAC CTACAACCCG
GCGTGCCCGC CCGAGCTCGA CGATATCGTC ATGACCGCGC TGGCCAAGTC GCCCGAGGAG
CGCTGGCAGA CCGCGGGCGC CATGCACCGG GCGCTGGACT CGGTGGCCAA GCGCGGCGGC
TTCCAGGCCA CCAACCGCGA GATCGCGGAG TGGATCGAGT GGGCCTTTCA GCAGCCGCTG
CAGTCCAAGC GGGTCGAGCC GACGGCGCCG CGGCCGCCGC GCACGCCGGT CAAGGAGCCG
ACGCTCAAGT CGTCGTCGCC GGTGGCTCCG GGCGACAATC TCGACTCGGC CAGCGTCGAG
CTGGTGTGGG GCGGACGCGG CTCGGGTAAG CGCGACTCGC GCGCGGGCGA CAGCGTCGAG
GACAGCCGCG AGTCCGCGCG CTCGGGAGCG CACCCGATCC CGGGCGGCTC GGGAGCGCAT
CCCATGCCGA GCCCGGGCGC CGGCGCCAAC GCCAACGCCG GTGGTAACAG GGCCGGCTCG
GGCGTCCATC GCCGGCCGGT GGCACCGGCC TCGGCGGCCG CGCTCTACAA TCAGCAGGCC
GCCCAGCAGA CGCCGGGGAC GCGGCCCGAT CCCTCGGCGC AGGCGGCCGG GCAGTCGACC
ATGTTGGGCG TGGCTCCGCC GCCGGGGTCG GCGTGGCGCG CCAGCAAGCC CGAGACCGGC
AGTCAGGCGA TCGCGACGCC GCGCAGCTCG TCCTCGCAGC AGCCGACGTC GCAGCCGACG
TCGCAGCCGC CGCCGTCGCA ACATCTGTCG TCGCAGCAGC CGGTGGCCCG GCAGCCCTCG
GGTGTGCCCG GGACCGGGCC GGTGCCGCGG CAGAGCGAGG CCCGGGTGCG CGCGCGCGCT
GATGCCACCG GGACCGCGCC GGTTCAGGTG CCGGGCAAAG ACCGCGCCGC GCTGCAGATC
GTGCTGGTCG TGGTGCTGTG CATCGCGGCC GCCGCCGGCG GCTACTACGC CGTCATCACG
CTGTTCAATT AG
 
Protein sequence
MRESPVATKG EKREPELFGP YEVYERIGVG GMATVHRAKK QGIEGFTREV ALKRMLSHLA 
DDDSFIQSFV REARLASQLQ HANIIHIHDL GRDGRVYYIA MEYVRGWDLR KILKQTAYAT
GPMPLAMMLT IARQLCDALD YAHNLADESG EPLGLVHRDV SPSNLLVAAD GHLKVIDFGI
AKATANSLRT LSGRVKGKFA YMAPEAIRGK QLDRRTDIFS MGIVAHEMLT ARPLFATKNQ
FDTIRRITQD EVSPPSTYNP ACPPELDDIV MTALAKSPEE RWQTAGAMHR ALDSVAKRGG
FQATNREIAE WIEWAFQQPL QSKRVEPTAP RPPRTPVKEP TLKSSSPVAP GDNLDSASVE
LVWGGRGSGK RDSRAGDSVE DSRESARSGA HPIPGGSGAH PMPSPGAGAN ANAGGNRAGS
GVHRRPVAPA SAAALYNQQA AQQTPGTRPD PSAQAAGQST MLGVAPPPGS AWRASKPETG
SQAIATPRSS SSQQPTSQPT SQPPPSQHLS SQQPVARQPS GVPGTGPVPR QSEARVRARA
DATGTAPVQV PGKDRAALQI VLVVVLCIAA AAGGYYAVIT LFN