| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5391 |
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| Symbol | |
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| ID | 8547803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7410259 |
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| End bp | 7411512 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646390064 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003269768 |
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| Protein GI | 262198559 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.59544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.2602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAC GCGCACAACG ACTCATTCCC TGGGCGGCCG CGCTGCTGCT CGCCGCCTCC
GTCGGCGCCT GCAAGAAGGA CGAGGGCGGC GCCGCGGGCG AGAATCCCGA GGGCAGCGCC
ACCGCGACCG ATTCGGGCGA GCCCATCGTG ATCGCCGTGG CCGGGCCGAT GACCGGCCAG
TACGCCTCGT TCGGCCAGCA GATGGCCGCG GGCGCCAAGC AGGCGGTCGC CGATCTCAAC
GCCAAAGGCG GCGTCCTGGG CCGACAGCTC CAGCTAGAGG TCGGCGATGA CGCCTGCGAT
CCCAAGCAGG CGGTGGCCGT GGCCAACCAG ATGGTGCAGC AGGGCGCGGT GTTCGTGGCC
GGCCACTGGT GCTCGGGGTC CTCGATTCCG GCCAACCAGG TGTACGACGA AGAGGGCATC
GTATCGATCT CGCCCGGCTC GACCAGCCCC AAGCTCACCG AAGAGGGCGG CGAGATGGTG
TTCCGCGTGT GCGGCCGCGA CGACCAGCAG GGCGAGGTGG CCGCCAAGTT TCTGATGGAA
CAGTTCCCGG GCAAGAACAT CGCGGTGCTT CACGACAAGA CCGCGTACGG CAAGGGTCTG
GCCGATGAGA CCCGCAAGAA CCTGCAGGCC GGCGGCCTCG AGCCGACGCT GTACGAGGCC
TACACCGCGG GCGAGAAGGA CTACACCGCG CTGGTCTCCA AGCTCAAGCA GAACGAGATC
GACGTGGTCT ACATCGGCGG CTACCACACC GAGGCCGGCC TGATCCTGCG CCAGATGCGC
GAGCAGGGCA TGGAGTCGGT GCTGATGTCG GGCGACGCCC TGGTCACGCA GGAGTACTGG
TCGATCACGG GCGACGCCGG CGCCGGTACG CTGATGACCT TCAGCCCGGA TCCGCGCAAG
AACGAGAACG CGGCCGCCGT GGTCGAGGTG TTCCGCGAGC AGAAGATCGA GCCCGAGGGC
TACGTGCTCT ACACCTACGG CGCGATCCAG GCCTGGGCCG CGGCTGCGGA GGCCGCTGGT
AAGGTGGATG CCGACGCGGT GGTCGAAAAA CTGCACGCGA TGGAGTTCGA GACTGTGCTC
GGCTCGATCG GTTTCGACGA CAAGGGCGAC GTCACCGCCC CCGGCTACGT GGTCTACGAG
TGGAAGGACG GCGCCTACGC GTACTACGGC GAAGAGGGCG GGGCGCAGGC CGAGGGCGGC
GAGGGCGGCG AGGGCGAGAA CGAGAACGAG AACGGGGAGC CCCCGAGCGA GTAG
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| Protein sequence | MIRRAQRLIP WAAALLLAAS VGACKKDEGG AAGENPEGSA TATDSGEPIV IAVAGPMTGQ
YASFGQQMAA GAKQAVADLN AKGGVLGRQL QLEVGDDACD PKQAVAVANQ MVQQGAVFVA
GHWCSGSSIP ANQVYDEEGI VSISPGSTSP KLTEEGGEMV FRVCGRDDQQ GEVAAKFLME
QFPGKNIAVL HDKTAYGKGL ADETRKNLQA GGLEPTLYEA YTAGEKDYTA LVSKLKQNEI
DVVYIGGYHT EAGLILRQMR EQGMESVLMS GDALVTQEYW SITGDAGAGT LMTFSPDPRK
NENAAAVVEV FREQKIEPEG YVLYTYGAIQ AWAAAAEAAG KVDADAVVEK LHAMEFETVL
GSIGFDDKGD VTAPGYVVYE WKDGAYAYYG EEGGAQAEGG EGGEGENENE NGEPPSE
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