Gene Hoch_5371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5371 
Symbol 
ID8547783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7386534 
End bp7387469 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content69% 
IMG OID646390044 
Producthypothetical protein 
Protein accessionYP_003269748 
Protein GI262198539 
COG category[R] General function prediction only 
COG ID[COG3687] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.971328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCA GTCGCGGCGA CTCTCCGGAC GGCCCGGCCA TCTCAGCGCG CTCGGCGCCC 
GCGCTGGCCT GCGCTATGCT CGGCGGCATG ACGCAACCAG CACACCCCCT TCCCACTGCC
GCCCTGCCCC GTCTGCGCGC CCGCCATCCC AAGATCGCGT TCGCCGACGC GGTGCCCCGG
CACTGGTTCG GCGGGCTGGC GTTGCCCACG CACGTCGCCA ACGGCGTCAA TCTGCTGTTT
CCGGCGGGTG AGCGCTTCTT CGTCCGCTCG GTCAAACACT ACCTCGAGCG CTTCCGCGAC
GACCCCGAGA TGAGCGCGCA GATCCGCGGC TTTTTCGGAC AGGAGGGCAG TCACGCCCGC
GAGCACGAGC GCTTCTTCGC CACCATGGAG GCGCAGGGCT ACGAGATCCG CAAATTTCTA
GAGGTCTACC AGCACATCAG CTTCGACATC ATCGAGAAGG CGGTGCCGCC CGTGCTGCGC
CTGGCCACCA CCGCGGCGTG CGAGCACTTT ACCGCGCTGC TCGCCGAGGT GGTGTTCGAT
AACGGCGCGC TCGATAAGGC GCATCCGCTC ATGCGCGAGC TGCTCACCTG GCACGCGGCC
GAGGAGCTCG AGCACAAGAC CGTGGCCTTT GACGTGCTCA AGCATGTCGA TGCGCGCTAC
AGCGTGCGCG TCGGCGGTCT GGCCATCGCC ACCGCCCTAC TCGCGGGCTG GTGGGTGGCA
GCGACCGCCA TGCTGCTGCG GCAGGATCGC GTGCCGCGCG CGCAGCGTCG GCGCGAGCGC
TCGCTCATGA AAGGCTGGCG CGCGCGCCCA CACTCGGTGG CGCGCGACAT CTTCGCCCGC
GGGATTCGCG ACTACCTGCG CCGGGACTTC CATCCCAGCG ATCGTCCCGA TCCTCCGCAG
TCGGCCGAGT ACCTGCGCAC CGCCTTCCCC GCCTGA
 
Protein sequence
MPGSRGDSPD GPAISARSAP ALACAMLGGM TQPAHPLPTA ALPRLRARHP KIAFADAVPR 
HWFGGLALPT HVANGVNLLF PAGERFFVRS VKHYLERFRD DPEMSAQIRG FFGQEGSHAR
EHERFFATME AQGYEIRKFL EVYQHISFDI IEKAVPPVLR LATTAACEHF TALLAEVVFD
NGALDKAHPL MRELLTWHAA EELEHKTVAF DVLKHVDARY SVRVGGLAIA TALLAGWWVA
ATAMLLRQDR VPRAQRRRER SLMKGWRARP HSVARDIFAR GIRDYLRRDF HPSDRPDPPQ
SAEYLRTAFP A