| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5367 |
|---|
| Symbol | |
|---|
| ID | 8547779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7381629 |
|---|
| End bp | 7383245 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646390040 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_003269744 |
|---|
| Protein GI | 262198535 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.475271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.589855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCCA AAGAAATCGT ATTTTCCACC CAGGCCCGCG CGGAGATCGC CAAGGGTCTG
AACATGCTCG CCAACGCAGT GAAGGTCACG CTTGGGCCCC GCGGTCGCAA CGTCGTGATC
GAGAAGTCCT GGGGCGCCCC GACGGTGACC AAGGACGGCG TGACCGTGGC CAAAGAGGTC
GAGGTCACCA ACAAGCTCCA GAACATGGGC GCGCAGATGA TGAAGGAGGT CGCTTCCAAG
ACCTCCGACA TCGCCGGTGA CGGCACCACC ACCGCCACCG TGCTGGCGCA GGCCATCTTC
ACCGAGGGCG CCAAGCTGGT CGCCGCCGGC GTCAACCCGA TGGACCTCAA GCGCGGCATC
GAGGCCGCGG TCGAGGAGAT CGTCGACGAG CTGTCCAAGC TCTCGACCCC GACCAAGGGC
AAGACCGACA TCGCCCAGGT CGGCACCATC AGCGCCAACG GCGACTCGAC CATCGGCGAC
ATGATCGCCG AGGCCATGGA GAAGGTCGGC AAAGAGGGTG TGATCACGGT CGAGGAGTCC
AAGACCATGC AGAGCGAGCT CGACGTGGTC GAGGGCATGC AGTTCGATCG CGGCTACCTC
TCGCCGTACT TCGTGACCGA CCCCGATCGC ATGGAGGTCG TGCTCAACGA CCCCTTCCTG
CTCATCTGCG AGAAGAAGAT CTCCAACATG AAGGATCTGC TTCCCGTGCT CGAGCAGGTG
GCCAAGTCGG GCCGTCCGCT GCTCATCCTC GCCGAGGACG TCGATGGCGA GGCGCTGGCC
ACCCTGGTGG TCAACAAGCT GCGCGGCACC CTGCAGGTGG CCGCGGTCAA GGCCCCGGGC
TTCGGTGACC GCCGCAAGGC CATGCTCACC GACATCGCCA CCCTCACCGG CGGTCAGGCC
GTCACCGAGG ACATCGGCGT CAAGCTCGAC GGCGTGACCC TCCAGGAGCT GGGCCAGGCC
AAGCGCGTTG TCATCACCAA GGACAACACC ACCATCGTCG AGGGCGCGGG CGAGACCAGC
GCCATCGAGG GCCGGGTCAA GCAGATCCGC CGCGAGGTCG AGGACACCAC CAGCGACTAC
GACCGCGAGA AGCTGCAGGA GCGCCTGGCC AAGCTGGTCG GCGGTGTCGC CGTCATCCGC
GTGGGTGCGG CAACCGAGGT CGAGATGAAG GAGAAGAAGG CGCGCGTGGA AGACGCCATG
CACGCCACCC GCGCGGCCGT CGAAGAGGGC ATCGTCCCCG GCGGCGGTGT CGCTCTCATC
CGCTCGGGCA GCCGTCTCGA CAAGCTCACC TTCGACGACG ACCGCCGCTT CGGCGTCAAC
ATCGTGCGCC AGGCCATCGA GGCGCCGCTG CGCCAGATCT CGCACAACGC GGGCGTGGAC
GGCTCGATCA TCGTCTCCAA GGTGCGCGAG GGCGAGGGCA ACTTCGGCTA CAACGCCGCC
ACCCTCGAGT ACCAGGACCT GGTCGAGAAC GGCGTCATCG ACCCGACCAA GGTCGTGCGC
TCGGCGCTGC AGAACGCGGC CTCGGTCGCC GGTCTGATGC TGACCACCGA GGCCCTCGTG
GCCGAGAAGG TCAAGGACGA GGACGACGCC GGCTCTCACG ACCACGGCGA CTACTGA
|
|---|
| Protein sequence | MAAKEIVFST QARAEIAKGL NMLANAVKVT LGPRGRNVVI EKSWGAPTVT KDGVTVAKEV
EVTNKLQNMG AQMMKEVASK TSDIAGDGTT TATVLAQAIF TEGAKLVAAG VNPMDLKRGI
EAAVEEIVDE LSKLSTPTKG KTDIAQVGTI SANGDSTIGD MIAEAMEKVG KEGVITVEES
KTMQSELDVV EGMQFDRGYL SPYFVTDPDR MEVVLNDPFL LICEKKISNM KDLLPVLEQV
AKSGRPLLIL AEDVDGEALA TLVVNKLRGT LQVAAVKAPG FGDRRKAMLT DIATLTGGQA
VTEDIGVKLD GVTLQELGQA KRVVITKDNT TIVEGAGETS AIEGRVKQIR REVEDTTSDY
DREKLQERLA KLVGGVAVIR VGAATEVEMK EKKARVEDAM HATRAAVEEG IVPGGGVALI
RSGSRLDKLT FDDDRRFGVN IVRQAIEAPL RQISHNAGVD GSIIVSKVRE GEGNFGYNAA
TLEYQDLVEN GVIDPTKVVR SALQNAASVA GLMLTTEALV AEKVKDEDDA GSHDHGDY
|
|---|
| |