| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5197 |
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| Symbol | |
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| ID | 8547609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7151229 |
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| End bp | 7151984 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646389874 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003269578 |
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| Protein GI | 262198369 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACA AGTTGCAAGG AAAAGTGGCG GTAGTAACGG GCTCGTCCAA GGGGATTGGC
GCGGAGATCG CGAAGAAGCT GGCGGCCGAG GGTGCCTCGG TGGTGGTCAA CTACGGCTCC
AGCGCGGACG CGGCCGCGCG TGTGGTCAGC GAGATCGAGT CCAAGGGCGG CAAGGCCCTC
GGGGTGCAGG CTGACGTCTC GAAACCTGGC GATATCGCCA AACTCTTCGC CGAGACCAAG
CGCGTATTCG GACGCCTCGA CGTATTGGTC AACAACGCCG GCGTCTACGG TCCGACGCCG
CTGGGCGAGA TCACGCTCGA GGAGTTTCAG CGCCAGTTCG GGCTCAACGT ATTCGGCCTG
ACGCTCGCCA CCCAGGAGGC GGTCAAGTAC TTCGACGAGG CCGGCGGCAG CGTCATCAAC
ATCGGCTCCG CCGTGAGCCG GGCAGCGTTC CCGGGCATGG GCGTGTACAC CGCCACCAAG
GGCGCCGTGG ATGCGCTCAC GCGCACCTTC GCGGCCGAGC TCGGCCCCAA GCAGATCCGG
GTCAACACGG TCAGCCCCGG CATGGTGCTC ACCGAGGGCA ACGCCGATAT GGCCGCGCCC
GGCAGCCCCT TGCGCACCAT GATCGAGGCG CAGACGCCGC TCGGCCGCAT CGGCCAGGTG
GACGATATCG CCCCGGCGGT GGCGTTCCTG GCCTCCGACG ACTCCGCCTG GATCACGGGC
GAGCTGTTCT TCATCAGCGG CGGCATGCGC GGCTAG
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| Protein sequence | MSNKLQGKVA VVTGSSKGIG AEIAKKLAAE GASVVVNYGS SADAAARVVS EIESKGGKAL
GVQADVSKPG DIAKLFAETK RVFGRLDVLV NNAGVYGPTP LGEITLEEFQ RQFGLNVFGL
TLATQEAVKY FDEAGGSVIN IGSAVSRAAF PGMGVYTATK GAVDALTRTF AAELGPKQIR
VNTVSPGMVL TEGNADMAAP GSPLRTMIEA QTPLGRIGQV DDIAPAVAFL ASDDSAWITG
ELFFISGGMR G
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