| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5196 |
|---|
| Symbol | |
|---|
| ID | 8547608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 7150313 |
|---|
| End bp | 7151149 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646389873 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IIB |
|---|
| Protein accession | YP_003269577 |
|---|
| Protein GI | 262198368 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAGC CTATCAGCGC CCTGTGTGAG CCGGTGCGCG CGCTCTTCTC CGATGTAGAC
GGCACCGTCA CCACGGCGGG TCGTCTCGAG CCCGCCACCT ACGAAACCCT GTGTTCCCTG
GTAGACGCCG GTATCGACCT GATTCTGGTC ACCGGCCGCC CGGCTGGCTG GGGGCAAGCG
CTGCTCTCGC TCACGCCCGC GTCGGCCGTG GTCACCGAGA ACGGCGGCGT CACCTTCATC
CGCCGCCCGG GTAGCAGGCC CGAGCGCGTG GACAAGTTCT ACGGCGTCTC GCTCTCGGCC
CTCGCCGGTT GGCGCGCGCG CATGGAGGCC GCCCTCGACC GCGCCCGCCA GCAGGTGCCC
GGCATCCGCC TCTCGGCCGA CAGCGCCTAT CGCGAGGTCG ATCTCGCGGT CGATTGGAAC
GAGGAGGTGT CGCTGCCGCA GAGCGACGCC GAGCGCGTGG CCGAGATCCT GCGCGCCGCC
GGCTTGCGCG CGGTGCGCTC GTCGGTGCAC GTCAACTTCT GCCCGCCGGT GTTCGACAAG
CTCAGCGCCT GTCTCGCCGT GGTGCGCGCG CTGTATCCCG ACATGCTCGG CGATACCGAC
GACGCGTCCG AAATCTCACT GGCGCCCTTT GTCTACGTCG GCGACGCGCT CAACGATGCG
CCCGCGTTTG CGCGCTTTCC GCGTTCGGTC GGGGTGGCCA ACGTGCGCGC CTTCTGGGAC
GATCTGCCGC AGCGTCCCGG CTATGTCACC GACGAGCCCG AGGGCGCCGG CCTGCGCGCG
CTCATCGCCC GGCTGCTGGC GCTGGGCCCG TCGCCGGCCC CGGCCTCGGT GGGCTGA
|
|---|
| Protein sequence | MSQPISALCE PVRALFSDVD GTVTTAGRLE PATYETLCSL VDAGIDLILV TGRPAGWGQA
LLSLTPASAV VTENGGVTFI RRPGSRPERV DKFYGVSLSA LAGWRARMEA ALDRARQQVP
GIRLSADSAY REVDLAVDWN EEVSLPQSDA ERVAEILRAA GLRAVRSSVH VNFCPPVFDK
LSACLAVVRA LYPDMLGDTD DASEISLAPF VYVGDALNDA PAFARFPRSV GVANVRAFWD
DLPQRPGYVT DEPEGAGLRA LIARLLALGP SPAPASVG
|
|---|
| |