| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5179 |
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| Symbol | |
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| ID | 8547591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7129886 |
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| End bp | 7131562 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646389856 |
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| Product | TonB family protein |
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| Protein accession | YP_003269560 |
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| Protein GI | 262198351 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain
[TIGR02136] phosphate binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCG TCGCCTTTGC CGACGTGCTC CAGATGCTGG CCTCGAATCA GACCACCTGC
CGCATTCTCC TGGGCGCAGA CGGCGTACTC GGCGAACTCT ACCTCGAGGA CGGCGCCCTG
GTTCACGCGC AGCACGGCGA GCTCGAGGGC AACGAGGCCG CGTTCGCCTT GATCGCGGTG
AGCGGCGGCA CCCCCTTCGA CGTCCAGGAC GATCAGCCCG CGCCCCGGCA CACGGTCGAG
GACGACATCG GCTATCTCAT CCTCGAGGCC GCCCGGCGCC GCGACGAGGG CTTGCTGCCG
CCGCCGGACG CGATCGTCCG CCTGCCCCCC GAGGCCGGCC CGGAGGTGGC GGCGCAGGTG
CAGCCTCGGC GCGCGCTGCG GGCGGTGCTG GCGGCCTCGG TGCTGGCGGT CCTGATAATG
GGCAGCTATC TGGCGCTGGC GCCGGTGGCC GCGCCCACGC CGACGGCGAC CGCCGCGGAC
GCCGCCGCGG ACACCGCCGC GGCTGCGCCC GACCCCGCCG GCAGCGAGGC CGCCGCCGAA
GAGCCTGTGC TCGACCTCGA CCTCGACCGC GGCCCGGTGT TTCTCGACGG CCCGCCCGCG
CTGCCGCCGG TCGAGGCCGC GCCGCTGTCG CCGACCGTGC TGTGCCGCAT CCGCGTCGAC
GAAACCGGCC GCGTGTCCGA AGCCGTCGTG TATCGCTCGC GCCCGGCCCT GGCCGCGTAC
GAAAACGCCG CCCTCGCCGC CGTTCGCGCC TATCGCTTCG CCCCCGCCAT GCGCCGCGGC
AAGCCGGCCG CCGCGTGGCT CAACTGGCCC GTGCACGTGG CCGCGCAGCG CAGCGAGATG
CTGGCCATCC GCGGCAGCGA GACCATCGGC GAGGCCCTGC TGCCGGCCCT GGCCGACGCC
TATCGGCAGC GCCACCCCGA GGCCTCGGTG GCGCTCGCGG CCTCGGGCCC CGGCGGCGGC
GTGGACGCGC TGCTCGCCGG CACCGTCGAC ATCGCCGCGG CCTCGCGCCC GATCTCGGCC
GACGAGCTGG CGCGCGCGGC CGCCCGCGAG CTGAGCATCG AGGAGTTCGT CATCGGCTAC
GACGGCGTCG CCATCATCGT CCACCCCGAC AACCCCGTGC GCGCGCTCGA TCTATCCCAG
CTCCGCGCGC TGTTCTCCGG ACAGGTGGCG AGCTGGAGCG CCCTGGGCGG CGCCGACCGC
GCGGTGCAGC TCTTCGGCCG CCCCCAGGGC GCGGGCACTC GCGCGCTGTT CGAGGCCATG
GTGTTTCAGC GCCCCGACAC CGGCGCCGAG GCCAACGACG GCGACGGCGC AGCGGCGAGC
TTCGCTCCGG GCGTGCGCGA GCCCGCCAGC AACCGCGAAC TCATCGCCGC CGTGGCCGCC
GATCCCGGCG CGGTGGCGTA CCTCAGCACG AGCTGGCTAC GGCCTGAGGT GGTCGCCGTC
GCCCTGTCCG AAGAACCGGG CGGCGACGCG GTCGAGCCCA CGCCGGAGTC CATCCGCACC
GGCCGCTACC CCTTGCACCA CCCGCTGCAC ATGTACGCGC GCGGCCCGCT CGACAACGCG
GTCGCGCGCT TCCTGCTGTT CGCGCTATCC CCGGGCGGAC AAGCGATCGT TCGCGCGCAC
GGCTTCGCCG ACGGCGCCCT GCCCCTCAAC TTCGCGCTCG AACAGCTCGC GCGCTGA
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| Protein sequence | MRAVAFADVL QMLASNQTTC RILLGADGVL GELYLEDGAL VHAQHGELEG NEAAFALIAV
SGGTPFDVQD DQPAPRHTVE DDIGYLILEA ARRRDEGLLP PPDAIVRLPP EAGPEVAAQV
QPRRALRAVL AASVLAVLIM GSYLALAPVA APTPTATAAD AAADTAAAAP DPAGSEAAAE
EPVLDLDLDR GPVFLDGPPA LPPVEAAPLS PTVLCRIRVD ETGRVSEAVV YRSRPALAAY
ENAALAAVRA YRFAPAMRRG KPAAAWLNWP VHVAAQRSEM LAIRGSETIG EALLPALADA
YRQRHPEASV ALAASGPGGG VDALLAGTVD IAAASRPISA DELARAAARE LSIEEFVIGY
DGVAIIVHPD NPVRALDLSQ LRALFSGQVA SWSALGGADR AVQLFGRPQG AGTRALFEAM
VFQRPDTGAE ANDGDGAAAS FAPGVREPAS NRELIAAVAA DPGAVAYLST SWLRPEVVAV
ALSEEPGGDA VEPTPESIRT GRYPLHHPLH MYARGPLDNA VARFLLFALS PGGQAIVRAH
GFADGALPLN FALEQLAR
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