Gene Hoch_5161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5161 
Symbol 
ID8547573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7109716 
End bp7112100 
Gene Length2385 bp 
Protein Length794 aa 
Translation table11 
GC content67% 
IMG OID646389838 
Producthypothetical protein 
Protein accessionYP_003269542 
Protein GI262198333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGA GGACCAAGGT CGCCCCCGAT CGAGTCCCCC GCGCGACCAG ACGCCCGCTC 
GGCGTCTTGG TCGCTGTGCT CGGCCTGCTG CTGCTGTATG CGCCGCTCGC GCACGCCCAA
CAGGACTTCT TCGAATCGTC GCCCGGCCCG CTCAGCGAGA GCCACGCGTC GATCGACGGT
CAGGACAACT GCAACGAGTG CCACAACAAC GGCCGTGAGC TGTCCAAGGA CAAGTGTCTC
AATTGCCACG ACCACAACGA CCTGCGCACG CGCATCCGCG CCGGCGAGGG CTTCCACGCC
TCGCGCAAGG TCGGCAACAA GCCGTGCGAG TCGTGCCACC TCGAGCACAA GGGCCGCAAC
TACGACCTGC GCGGCTGGAA CTCGGTGGGC GGTGAGAAGA ACTTCGACCA CGACCTGACC
GGCTGGCCGC TCAAGGGCAA GCACGCGACC ATCGACTGCT CGCGCTGCCA CAAGCGCACC
AACCGCCAGG GGCTGCGCCT GTATCTGGAA GAGGCCGAGC ACTGCGGCGA TTGCCACAAG
GACGATCAGC CGCACGGATT CGTACGCATG GACAAACTCG ACTGCGCGCG CTGCCACACC
GAGAGCCTGT GGAAGCCGGC CAAGCGCAAG ATGCAGTTCA ACCACAACAA CCCCAAAGAC
GCCGACATGC CGCTGCTGGG CTCGCACGCC GACGTCACCT GCGGCAAGTG TCACCCGGGT
TCGCGCTTCA ACCTGCAGTT CAAGGACCCG GCCGCGTGCC AGAACTGCCA CAAGAGCCCA
CACGAGGGTC ACCTCTTCGG CAGCCGCGAC TGCACCAAGT GCCACTCGCC GCTGTTCCGC
ACCCTCGATC AGCACCAGTT CGAGCACGGC CGCGAGACCC GCTTCTCGCT CACCGGCGGG
CACGCCAAGG CCAAGTGCTA CGACTGCCAC ACCAAGCGCC TGGGCAAGCG CAAGCCCAAG
CGCGAGTGCG AGACCTGCCA CGCCGAGGAC AACCGCCACG GCAACCGCTT CAAGGCCTTC
GGCAACCCGC CCAAGTGCGC CGTGTGCCAC GCGGCCTCGC GGCAGTGGAC GCCCGACATC
ATCTTCGATC ACGACAAGCG CACCAAGTTC GCGCTCACGG GCAAGCACGC GCGCACCGAG
TGCCGGAGCT GCCACCGCGG CAAGCAGCCC TCGGAGTTCG AGCGCTTCGA TCCCAAGACC
GTGGGCTGCA TGGGCTGCCA CGCGCACAAG AACGTCCACG AGGGCGAGTT CCAGGACAAC
CAGTGCCTGG GCTGCCACAA GATGGCCGGC GTGCGGCAGA TCAACGAGGA GAGCGTGGAG
CTGTACCACG GCCCTGAGTC GCGCTTCCCG CTCACCCAGA AGCACGACGG CGTGGCCTGC
GAGAAGTGCC ACTTGAACGA CGTGTACAAG AACACGCCCA TCGAGTGCGG CGCGCGCTGC
CATGAGGATC GCCTGCACAA GGGCACGCTC GGCGACTACT GCCGGCGCTG TCACGACGGC
GGCCTGTGGG ACGCGGTGGC CTTCGATCAC ACCGAGGACA CCGAGTACCC GCTCGAGGGT
CTGCACCAGG TGGTGCCCGA CTGCGCGAGC TGCCACCCGG CGCGCGACTA CGCGAGCACG
CCCACCGACT GCGCCTCGAG CGGCTGCCAC GCCAGCGACG ACGCGCACAA CGGCAAGCTC
GGCAACCGCT GCGACACCTG CCACCAGGTC ACCGGCAGCA ACATCTTCAA CCACAACACC
ATGTCGGCCT TCAAACTCGA CGGCGCGCAC CTCGACGCCC GCTGCAGCGA GTGCCACGCG
TCCATCGAGT TCAAGCCGCA GCCGAGCAAC TGCTTCGGCT GCCACCCCGA GCCCGATGTG
CACAAGGGCC AGTACGGCAC CCAGTGCGAG ACCTGCCACT CGACCGCCGA CTGGCGCGAC
ATCCAGGCCC TGCACGACGT CGGCGACTTC TCGCTCCAGG GCTCGCACGA CCGCCTGCCC
TGCGTCGATT GCCACATGGA CAACCGGCCG CTCGCGGGCG CCGGCAACCT GTGCATCAAC
TGCCACCGCC AGGACGACAT CCACTCCAAC TCGCTGTCGC CGCGCTGCGG GGAGTGCCAC
TCGCAGTGGT CGTTCGCGCC CGCGCGCTTC GACCACAGCA ACGTCGGCTG CTTCCTCACC
GGCACGCACC GCATCATGCC CTGCTACGAC TGCCACAAGA CCGGCTCGTT TGGCGCGCTC
GACGGCTCGT GCGAGTCCTG CCACATCGAC ACCGCGCTGC GCGTCGGGGA CAGCGTCGTT
CCCGGTCACA GCGGCCTCAC CGGCTGCGGA ACCTGCCACA ACCCCAACTC CTGGAACGGG
GCACAGGGTA CGAACGCCCT CGGGGGGAAC TCGATATGTC GCTAA
 
Protein sequence
MPARTKVAPD RVPRATRRPL GVLVAVLGLL LLYAPLAHAQ QDFFESSPGP LSESHASIDG 
QDNCNECHNN GRELSKDKCL NCHDHNDLRT RIRAGEGFHA SRKVGNKPCE SCHLEHKGRN
YDLRGWNSVG GEKNFDHDLT GWPLKGKHAT IDCSRCHKRT NRQGLRLYLE EAEHCGDCHK
DDQPHGFVRM DKLDCARCHT ESLWKPAKRK MQFNHNNPKD ADMPLLGSHA DVTCGKCHPG
SRFNLQFKDP AACQNCHKSP HEGHLFGSRD CTKCHSPLFR TLDQHQFEHG RETRFSLTGG
HAKAKCYDCH TKRLGKRKPK RECETCHAED NRHGNRFKAF GNPPKCAVCH AASRQWTPDI
IFDHDKRTKF ALTGKHARTE CRSCHRGKQP SEFERFDPKT VGCMGCHAHK NVHEGEFQDN
QCLGCHKMAG VRQINEESVE LYHGPESRFP LTQKHDGVAC EKCHLNDVYK NTPIECGARC
HEDRLHKGTL GDYCRRCHDG GLWDAVAFDH TEDTEYPLEG LHQVVPDCAS CHPARDYAST
PTDCASSGCH ASDDAHNGKL GNRCDTCHQV TGSNIFNHNT MSAFKLDGAH LDARCSECHA
SIEFKPQPSN CFGCHPEPDV HKGQYGTQCE TCHSTADWRD IQALHDVGDF SLQGSHDRLP
CVDCHMDNRP LAGAGNLCIN CHRQDDIHSN SLSPRCGECH SQWSFAPARF DHSNVGCFLT
GTHRIMPCYD CHKTGSFGAL DGSCESCHID TALRVGDSVV PGHSGLTGCG TCHNPNSWNG
AQGTNALGGN SICR