| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5154 |
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| Symbol | |
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| ID | 8547565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7098705 |
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| End bp | 7100573 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646389830 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003269535 |
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| Protein GI | 262198326 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCA ACGCCCTCCT CAAGGTTGGA ATCTCTGCCG TGGTGCTGGC AGCGGCGCTG
TACGCGGCCT TTAGTCTGTA TATGTCGGGC GAGCCGGCGC TCGCTGCCGT CTGTCTGGGC
GCCTTCGCGC TCGGCGTCTA CGTGTACACG GCGGCGCGCG CGCGCACCTA TCGCTATCTC
TTCCCCGGTT TGGCAGGACT CGCGATCTTC GTCTTGTTGC CGCTGGTCTA CACCATCGCC
CTGGGCTTCA CGCGCTACCG CACCGAGAAC TTCCTCACCT TCGAGCGCGC CACCGCCGCG
CTGCTGGGCG AGACCTTCGA GCGTCCGGGC GATCGCTACC GGGTGAGCCT GCTGAGCGCC
GAGGACGGCG CGTACCGGCT GCTGCTCGAG ACCGTGGCCC AGCCCGCCGA GGCTGTCGAG
CCGGGCGAGC CCGCCGACGC CGCCGATGAA GGCGACAGCA TCTTCGGCGA CGAGGACGAG
GGCGACAGCA TCTTCGGGGA GGAAGAGGAG GAGGACAGCA TCTTCGCCGA CGACGCGGAC
GCGGAGGCGG GGGACGAGGA CAGCATCTTC GGGGAGGAGG AGGAGGACAG CATCTTCGCC
GACGACGAGG ACAGCATCTT CGGGGAGGAG GAAGAGGACA GCATCTTCGC CGACGATGAG
GATGGCGACG CCGCGGCCGA TGACGATGCC GGCGAGGATT CGCAGGGCGC GCGCGGCGCG
TTCTTCGTCT CCGAGCCCGT GGCTCTCGAC GAGCTGGTGG GCGAGGACGT CGGCGAGGAC
CCGGCGGTGT TGCGCGCCGT GCCCCTGAGC GAGCTGCCCG CCGTCACGCC CGAGGATGCG
CTCTCGCGCA TCGAGCTCAT CAAGCGCCGC GACGCCTTGC AGCGGGTATC GGTGCGCTTC
CCGGACGATA GCTGGGCGGT CAAAGACAAG CTCAGCATCG ACCTGTTCTT GCCGCAGACC
GCGCTCTACA CCCAGAACCC CGATCAAACG CTGGTCAACA ATCGCACCGG CGAGGTGCTG
ACGCCGAACT TCGACACCGG CTTCTACGAG AACGCGGCTG GCGAGTTCGT CCGTCCCGGT
TTTCGCGTGC TTGTCGGCTT CGACAACTAC ATGCGCCTGC TCACCGACCG GCGCATTCAG
GAACCCTTCC TGCGCATCTT CCTGTGGACG GTGCTGTTCG CCGGGTTCAC GGTGCTGTTC
ACGCTCATCG TCGGGCTGGT GCTGGCGGAG CTGATGAGCT GGGAGGCGCT GCCGATGCGG
GGCCTGTACC AGATCCTCTT GTTCCTGCCT TACGCGGTGC CCGGCTTTAT CTCGATCCTG
GTGTTCAAGG GTCTGTTCAA CTCGGCATCG GGCGAGATCA ATCAGATTCT GCTGGATCTC
TTCGGCGTCG CGCCCGATTG GTTCGGCGAC CCGTTCCTGG CCAAGGTGAT GATTCTCATC
GTCAATACCT GGCTCGGGTA CCCGTACATC ATGCTGCTGT GCATGGGTCT CAAGAAGTCG
GTGCCCTCGG ACCTGTACGA GGCCACGGCG CTGGCCGGCG CCAGTCCGCT CACCAACTTC
CTCAAGATCA CCTGGCCGCT CATCCGCAAG CCGCTCACGC CGCTGCTCAT CGCGTCGTTC
GCGTTCAACT TCAACAACTT CGTGCTGGTG TTCCTGCTCA CGGGCGGTCG CCCCGACTTC
CTCAATACCA GCACGCCGGC GGGCGAGACC GATATCCTGG TGAGCTACAC TTATCGCATC
GCGTTCCAGG ATTCCGGCCA GAACTACGGT CTGGCCGGCG CCATCTCGAC CCTGATCTTC
GTCCTGGTCG CCATCCTGTC GATCGTGAAT CTGCGGATGA CGAACGTGAA CAAGGAAGAG
AGGCGCTGA
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| Protein sequence | MMRNALLKVG ISAVVLAAAL YAAFSLYMSG EPALAAVCLG AFALGVYVYT AARARTYRYL
FPGLAGLAIF VLLPLVYTIA LGFTRYRTEN FLTFERATAA LLGETFERPG DRYRVSLLSA
EDGAYRLLLE TVAQPAEAVE PGEPADAADE GDSIFGDEDE GDSIFGEEEE EDSIFADDAD
AEAGDEDSIF GEEEEDSIFA DDEDSIFGEE EEDSIFADDE DGDAAADDDA GEDSQGARGA
FFVSEPVALD ELVGEDVGED PAVLRAVPLS ELPAVTPEDA LSRIELIKRR DALQRVSVRF
PDDSWAVKDK LSIDLFLPQT ALYTQNPDQT LVNNRTGEVL TPNFDTGFYE NAAGEFVRPG
FRVLVGFDNY MRLLTDRRIQ EPFLRIFLWT VLFAGFTVLF TLIVGLVLAE LMSWEALPMR
GLYQILLFLP YAVPGFISIL VFKGLFNSAS GEINQILLDL FGVAPDWFGD PFLAKVMILI
VNTWLGYPYI MLLCMGLKKS VPSDLYEATA LAGASPLTNF LKITWPLIRK PLTPLLIASF
AFNFNNFVLV FLLTGGRPDF LNTSTPAGET DILVSYTYRI AFQDSGQNYG LAGAISTLIF
VLVAILSIVN LRMTNVNKEE RR
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