| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5051 |
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| Symbol | |
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| ID | 8547462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 6968736 |
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| End bp | 6970118 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646389727 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003269432 |
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| Protein GI | 262198223 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.610108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.479337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGCA AAGTGCTGCT CGCCGGCGAG GACCTCGTCG CGCTGGAACC GCTCCAGCGC
GCGCTGGCGG AGCGTGGCTT CGAGTGTCGC CGCAGCGACA GCGTGCGCGA GGTGCTGGCC
GCGGCCGCGC GCGGCGAGAT CGACGTGGTG CTGGCGCAGC CGTCGCTATC GGCCGGACCC
GGCGAAGATC TGCGGACCCT GCTGGCAGCC GCCGGCGCCG ACGTGCAGGT GGTGGTGCTG
CCCTCAGTCG CGCTCGCCGA CCCCGGCAGC GCGCGCGAGC TCGACGCGCT CGAGCTGGGT
CTGCACCGGG CCGTGCGCCG GCGCGCTCGC CGCGGCCGCG ACGCCGAGGC CGAGGCCGGC
GCCGACGCTG CCGGGGGCGC CGCCGAGCCC CACGGCTTCG ACGCCTTGCT CGGCAGCAGC
GCGCCCATGC AGCAGCTCTA CGAGCTCATC GCGCGCGCCG CGCGGACCGC GGCCTCGGTG
CTCATCACCG GCGAGAGCGG CACCGGCAAG GAGCTGGTCG CGCGCGCCCT GCACCAGCGC
AGCCGGCGCG CCGAGGGCCC CTTTGTGGCC CTCAACTGCT CGGCGATTCC CGAGAATCTG
CTCGAGAGCG AGCTTTTCGG CCACGTCAAA GGCGCGTTCA CCGACGCCAA GAGCACGCGC
GCCGGGCTGC TGCTCAACGC CTCGGGCGGG ACGATCTTTC TCGACGAGAT CGGCGACATG
CCCATGGCGC TGCAGCCCAA GCTCCTGCGC GCGCTGCAGG AGCGCACCAT GCGCCCGCTC
GGCAGCGACC ACGAGCAGAC CTTCGACGTG CGCGTGGTCG CGGCCACCAA CCAGGACCTC
GAGCGCGCGG TGCAGGCCAA GCGCTTTCGC GAGGACCTGT ACTACCGGCT CAACGTCATC
CACGTGTCGC TGCCGCCGCT GCGCGCGCGC ATCGGCGACG TGCTGGTGCT GGCCCAGCAT
TTTGTAGAGA GCTTTGCCGT CCAGATGGAC AAAGACCTGA GCGGGCTGTC GGCGTCCGCG
GCCGAGGCCC TGCTCAGCTA CGCCTGGCCC GGCAATGTGC GCGAGCTGCA GAACTGCATC
GAGCACGCCG TGGCCATGAC CGGCAGCCGC GAATTGCAGC GCGCCGACCT GCCCGAGAAG
CTGCGCCACG CGCGCCCGGC GCCCGCGCTG GCGCTGGCGC TGGCCGAGGC CGAGCCCGCG
GGCGAGCTGG TGTCCATGGA CGAGGTCGAG CGCCGCTACA TCGCCCGCGT GCTCCACGCC
GTGGGCGGCA ATAAACGCGA GGCCGCGCGC ATCCTCGGCT TCGACCGCAA GACCCTGTAC
CGCAAGCTCG AGCGCTACGG CGAGCGCGCT GAGACCGGCG GCGAGCGCGG CGACGAGGCC
TGA
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| Protein sequence | MMGKVLLAGE DLVALEPLQR ALAERGFECR RSDSVREVLA AAARGEIDVV LAQPSLSAGP
GEDLRTLLAA AGADVQVVVL PSVALADPGS ARELDALELG LHRAVRRRAR RGRDAEAEAG
ADAAGGAAEP HGFDALLGSS APMQQLYELI ARAARTAASV LITGESGTGK ELVARALHQR
SRRAEGPFVA LNCSAIPENL LESELFGHVK GAFTDAKSTR AGLLLNASGG TIFLDEIGDM
PMALQPKLLR ALQERTMRPL GSDHEQTFDV RVVAATNQDL ERAVQAKRFR EDLYYRLNVI
HVSLPPLRAR IGDVLVLAQH FVESFAVQMD KDLSGLSASA AEALLSYAWP GNVRELQNCI
EHAVAMTGSR ELQRADLPEK LRHARPAPAL ALALAEAEPA GELVSMDEVE RRYIARVLHA
VGGNKREAAR ILGFDRKTLY RKLERYGERA ETGGERGDEA
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