Gene Hoch_5049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5049 
Symbol 
ID8547460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6966178 
End bp6967617 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content74% 
IMG OID646389725 
ProductPhosphomannomutase 
Protein accessionYP_003269430 
Protein GI262198221 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.721342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.477893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCA GCGTCTTTCG CGAATACGAT ATCCGCGGCG TGGCCGAGCG CGACCTCGGC 
GGCGACTTCG CCCGGCTGCT GGGTCGCGCC ATGGGCCAGC GCTTGCACGC CGTACGCAGC
CCCGCGCTCG CCGCTGAGGC CCGGCCGCGG CTGGTGGTCG GGCGCGACTG CCGGGTGTCC
TCGCCGCGCC TGGCGCGCGC GCTGATCGCG GGGGCGCGCG CGGTCGGCGT CGACGTCATC
GAGCTGGGCG TGGTGCCGAC GCCGGTCTTC TATTACGCGG TGCACGCGCT GGCGCCCGAG
GGCGGCGTAC AGGTCACCGG CAGCCACAAC CCGGCCCGCG ACAACGGCTT CAAGCTGATC
TGCGCCGGCG AGCGCCTGCA CGGCCCGGCC ATCCAGGAGC TGCGCGCGGC CATGGAGCTG
GCCGAGGCCC AGGGTCAGCC CGGCGGCGCC GCGGCGCCAG AGCCCGGGCA GTGCACGACC
CACGACGCCA CCGCGGCCTA TCTGCGCATG TCCGCGGCCA GTCTGCGCAT GGGCCCGCGC
CGCTGCAAGC TGGTGCTCGA CGCGGCCAAC GGCGCCGGCG GCCCCACCGC GCTGGCCCTG
TTTCGCCAGC TCGGCTTCGA GGTCGAGCCG CTGTACTGCG AGATGGACGG GCGCTTCCCC
AACCACTCGC CGGATCCCCT GGTGCCCGCC AACCTGGTCG ACCTGCGCCA GCGCGTGCGC
GACACCGGCG CCGAGCTCGG CATCGCGCTC GACGGCGACG CCGACCGCAT CGCGGCCGTG
GACGCGCGCG ACCGGGTAAT GTGGGGCGAC CAGCTCATGA TCCTGCTCGG CCAGGCGCTC
CTGCGCGAGC ACCCGGGCTG CGACATCGTG GCCGAGGTCA AATGCTCGCA GGCGCTCTTC
GATCTGCTCG CCGCCGCCGG CGGCGTGGTG CACATGGGCC GCGCCGGCCA CGCCCTGGTC
AAGGCCAAGA TGCGCGAGAC CGGCGCCCTG CTCGGCGGCG AGCTCAGCGG TCACCTGTTC
TTTGCCGACC GCCACCCCGG CTACGATGAC GGCATCTACG CCGGCGCGCG GCTGCTCGAG
CTTCTCTCGC ACGCGCCTAC CACGCTCGCC GAGCACTGCG ATAGTCTGCC GGCCATGGTC
AACACGCCCG AGCTGCGCCT GGCCTGCCCC GACGAGGCCA AGTTCGCCGT GGTCGCGGCC
GCCGGTGCGC GTCTGCGCGC GCGCGATGAC ATCCGCGGCG TGGTCGAGAT CGACGGCACC
CGCGTGACCT TTGCCGACGG CTGGGGGCTG GTGCGGGCGT CGAACACCGA GCCGGCCCTG
GTGCTGCGCT GCGAGGCCAG CTCGCACGAG CGCCTGAGCG CCATCCGCAC GCTCCTCGAA
GAGACCGTGG CCGCGGCCAT GGACGACGCC GGCGCCCCCA CTCCAGGAAC AACGCCATGA
 
Protein sequence
MNPSVFREYD IRGVAERDLG GDFARLLGRA MGQRLHAVRS PALAAEARPR LVVGRDCRVS 
SPRLARALIA GARAVGVDVI ELGVVPTPVF YYAVHALAPE GGVQVTGSHN PARDNGFKLI
CAGERLHGPA IQELRAAMEL AEAQGQPGGA AAPEPGQCTT HDATAAYLRM SAASLRMGPR
RCKLVLDAAN GAGGPTALAL FRQLGFEVEP LYCEMDGRFP NHSPDPLVPA NLVDLRQRVR
DTGAELGIAL DGDADRIAAV DARDRVMWGD QLMILLGQAL LREHPGCDIV AEVKCSQALF
DLLAAAGGVV HMGRAGHALV KAKMRETGAL LGGELSGHLF FADRHPGYDD GIYAGARLLE
LLSHAPTTLA EHCDSLPAMV NTPELRLACP DEAKFAVVAA AGARLRARDD IRGVVEIDGT
RVTFADGWGL VRASNTEPAL VLRCEASSHE RLSAIRTLLE ETVAAAMDDA GAPTPGTTP