Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5037 |
Symbol | |
ID | 8547447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 6948798 |
End bp | 6950516 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646389712 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_003269418 |
Protein GI | 262198209 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.565725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGACA AGCAGTTCGA CGCTGTAATC GTGGGTTCGG GGTTTGGCGG CGCGGTGATG GCTTATCGAC TGGCCGAGGC CGGGCTGCGG GTGTGTGTGC TCGAGCGTGG CAAGAAGTAT CCGCCGGGTT CGTTTCCGCG CACGCCGGCG GCGCTGAGCC GCGCCACCTG GGACCCGGAC GCGGGCAAAC AGGGCCTCTT CGATATCTGG TCCTTCCGCA CCATGGACGC GGTCACGGCC AGCGGTCTGG GCGGCGGCTC ATTGGTCTAC TCCAACGTGC TGCTGCGCAA GGACGAGCGC TGGTTCGTGA CCGAGGGCAC CACGCCCGGC GTGTTCGAGC ACTGGCCCGT GAACCGCGCC GACCTCGACC CGCACTACGA CGCGGTCGAG AAGGTGCTGC GCCCCAAGCC CTATCCCTTT GCGCAAGAGC CCTACGCGGA CACACCCAAG ACCCACGCGA TGCGCGACGC GGCCGCGGCC GTGCGCGACT GCGAGTGGTT CCTGCCGCCG CTCACGGTCA ACTTCGCGCC TTCGGACAAG CGTCCGGGTG TGCCCTTCGA GGGCCCGCCC GATATGCACG GCGAGCCGCG CTCGACCTGC CGGCTGTGCG GCGAATGCAA TATCGGCTGC AACTACGGCA GCAAGGACTC GCTCGACTTC AACTACCTGT CGATGGCGCA ACGCGCGGGC GCCGAGCTGC TCACCCGCGC CGAGGTGCTG TCCTTCGAAC CCGCCGGCGC CTACGGCTAC CGGGTCAACT ACGTCGAGCA CACGCCCGCG CTCGAGGGCC GTCCGTACCG GCGCTCGGAT CTGCCGACGC ATACCATCCG CGCCAAACGC CTGATCCTGG CCGCCGGTGC CCTGGGCAGC ACGGCGCTGC TTCTGCGCAT GCGCCGCGAC AGGGAGGCAT TTGGCAAACT CAGCCGCATG CTCGGCCACC GCTTCAGCGG CAACGGCGAC CTGCTGACCA TGGCCCTGCA CTGCTGCGAC CGCGACGACC ACCGCGGGCC GCGGCGCATC GACGCCAGCT TCGGGCCGGT GATCACCAGC GCCATCCGCG TCACCGATGC CCTCGATTCC CCCACGCGGC CGCCCCACGA CACGGTCCAC GAGCGCGGCC TGTACATCGA AGACGCCGGC TTTCCCGCGT TCTTGGCCTG GGTGCTGGAG AGCGCGCCGG TGCCCAGCAC CATCGGCCGC GCGCTCGGGT TCGCGCACCG CTACTTGGCC GGACACCTGG GCTTCAACTC CGATACCAAC CTCAGCGCCG AGCTGTCCGA ATTCATCGGC GATGCCCGCC TCACCGAGAC CTCGCTGCCG TTTCTGTGCA TGGGCCGCGA TGTCGCCAGC GGGGTCATGC ACGTCGACGC GGGCGACAAT CTCGACCTGC ACTGGAGCAT GGACGACTCG GCCGAATACA TCGATCGCGT GCGCCAGATG ACCCAGCGCC TGGCCGACGC GCTCGGCGGC TACCACGCCG ATAATCCGCT GTGGCGGCTG CGCCGCTTCA TCACCGTGCA CCCGCTGGGC GGCTGCCCCA TGGGCCGCCA CGCAGGCGAG GGCGTGGTCG ATAGCTGGGG CCACGTGTTC GGCTACCCCG GCCTGTACGT GGCCGACGGC GCCACCATGC CGGGCCCGGT GGGCGCCAAT CCCTCGCTCA CCATCGCCGC GATGGCCGAC CGCTGCGCCG ACGGCATCCT GCGCGAACTG GGCCGCTGA
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Protein sequence | MRDKQFDAVI VGSGFGGAVM AYRLAEAGLR VCVLERGKKY PPGSFPRTPA ALSRATWDPD AGKQGLFDIW SFRTMDAVTA SGLGGGSLVY SNVLLRKDER WFVTEGTTPG VFEHWPVNRA DLDPHYDAVE KVLRPKPYPF AQEPYADTPK THAMRDAAAA VRDCEWFLPP LTVNFAPSDK RPGVPFEGPP DMHGEPRSTC RLCGECNIGC NYGSKDSLDF NYLSMAQRAG AELLTRAEVL SFEPAGAYGY RVNYVEHTPA LEGRPYRRSD LPTHTIRAKR LILAAGALGS TALLLRMRRD REAFGKLSRM LGHRFSGNGD LLTMALHCCD RDDHRGPRRI DASFGPVITS AIRVTDALDS PTRPPHDTVH ERGLYIEDAG FPAFLAWVLE SAPVPSTIGR ALGFAHRYLA GHLGFNSDTN LSAELSEFIG DARLTETSLP FLCMGRDVAS GVMHVDAGDN LDLHWSMDDS AEYIDRVRQM TQRLADALGG YHADNPLWRL RRFITVHPLG GCPMGRHAGE GVVDSWGHVF GYPGLYVADG ATMPGPVGAN PSLTIAAMAD RCADGILREL GR
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