Gene Hoch_5020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5020 
Symbol 
ID8547430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6924903 
End bp6925739 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content66% 
IMG OID646389696 
ProductAAA ATPase central domain protein 
Protein accessionYP_003269402 
Protein GI262198193 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.422648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.019419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGT TCGCCACGAG TGAGTTCGAT AGGTTCCAGG GCACCGAGAC GTACATCGCG 
TCCGCGGATT TGCAGCATTC GGTCAACGTC GCCATCGCGC TCGAGCGCCC GCTGCTGCTG
CGCGGCGAGC CCGGCACCGG CAAGACCCTG CTGGCCGAAA ACGTCGCCGC CGCGCTCGGC
CATCGCATCG TGCGCTGGCA TATCAAGTCC ACGACCAAGG CCCGCGACGG CCTGTACGTC
TACGACACCG TGGCGCGTCT GCACGACAGC CGCTTTGGCG ACGGCGACGT GCGCGACATC
GCGCGCTACA TCAAGCTCGG GCCCATGGGC CAGGCGCTGG CCTCGGAGGA GCGCGTGGTG
CTGCTCATCG ATGAGATCGA CAAGGCCGAT GTCGAGTTCC CCAACGACCT GCTGCTCGAG
CTCGACGCCA TGCGCTTTCA CATCGACGAG ACCGGCGAGG ATGTCATCGC GCGCGAGCGG
CCGATCGTCA TCATCACCTC GAACAACGAG AAGGAGCTGC CCGACGCGTT CTTGCGCCGC
TGTATCTTCC ACTTCATCGA GTTCCCCGAT CGCGAGCTGA TGGCCGAGAT CGTGCGCGTG
CATCACCCGG ACCTCGAGGA CGCGGTGCTC GATCAGTGTC TCGAGATGTT CTACGGGCTG
CGCTCGGTGC CCCGGCTGCG CAAGCGGCCC TCGACCAGCG AGCTGGTCGA TTGGATCTGC
GTGCTGCGCA AGGCCGGCGT GGATCTCGGA CGAGTGGGCG GCGGCATCCC GTTTTTGGGC
GCGCTGCTCA AGAACGAGCA CGATCTGGCC CAGGCCGGCA AGCGCGGGTT GGCGTGA
 
Protein sequence
MSEFATSEFD RFQGTETYIA SADLQHSVNV AIALERPLLL RGEPGTGKTL LAENVAAALG 
HRIVRWHIKS TTKARDGLYV YDTVARLHDS RFGDGDVRDI ARYIKLGPMG QALASEERVV
LLIDEIDKAD VEFPNDLLLE LDAMRFHIDE TGEDVIARER PIVIITSNNE KELPDAFLRR
CIFHFIEFPD RELMAEIVRV HHPDLEDAVL DQCLEMFYGL RSVPRLRKRP STSELVDWIC
VLRKAGVDLG RVGGGIPFLG ALLKNEHDLA QAGKRGLA