| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5008 |
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| Symbol | |
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| ID | 8547418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 6906756 |
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| End bp | 6908153 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646389684 |
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| Product | Restriction endonuclease S subunits-like protein |
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| Protein accession | YP_003269390 |
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| Protein GI | 262198181 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.441656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCTG ACGACGGCGC CGACGCGCTC GAATTCGATA GCGGCTACGC GCTCGGCGAG
CTGCTCGATG ATCTCGGACC GTGGTCCGGG AAACCCGGCG CAGCGCTGCC CGAGGGCTGG
CGCTGGTCGT CGCTGGGCGC TCTGGCCACG GGCAAAGCTC GCTACGGCGT CAATCTGCCG
GCGCGCCCCT ACGACGCCGG GCTGCCGCGC TTCGTGCGCA TCACCGATAT CGGCGACGAC
GGTCGGCTGC GCGACGACGC GCCCGTGAGC CTGAGCGATC CGGGCGCGGC CGATTATCGC
CTGAAACCCG GGGATCTGGC GGTTGCGCGC TCGGGCGCCA CGGTCGGCAA GTCGTATCTG
TACCGCCCCG AGGACGGCGT GTGCGTGCCC GCCGGCTATC TGTTGTGCGT GCCCCTGGCG
CCGTCGCGCT GCGAGCCGGC GTTCGTGGCC CAGTGGGCAC AATCGCGCGG CTATCGCGCG
TGGCTGCGCA GCGCGGTGCG CACGGCCGCG CAGCCCAATG TCAACGCCAG CGAGCTGGCG
ACCCTCCCGG TGCCGGTGCC GCCGCTCGAG GAGCAGCGCG AGGTGGCCCG CGTCCTCGCG
CTCGGCGACG CGCTGCTCGC GCACAGCGGG CGCATCATCG ACAAGCTCGG CCTGGTGTTG
GCGGCGCTGG TGCGCGATCT GCTCTCGCGC GGCATCGGGG AGGACGGCCG CATCCGCGAC
CCGGCGCGCC ATCCCGAGCT GTTTCGCGAG ACGCCGCTGG GTCTGCTGCC GCGCGCGTGG
TCGGTGAGCG AAGCCGGCGA GCTGTTGGCC GCGCTCAAAC CGGCGATGCG CAGCGGGCCC
TTTGGCAGCG AGCTGCGCAA GTCCGACCTG GTCGCCGAAG GCGTGCCTCT GCTGGGCATC
GACAACGTCG ACACCGACGC CTTCGTACCG CGGTATCGGC GCTTCGTGCC GCCGCATCTG
TTCCAGGCGC TGGGGCGCTA CGCGGTGCGG CCGGGCGACG TCATGGTCAC GGTGATGGGC
ACGGTCGGGC GCTCGTGCGT GGTCCCGGAC GATATCGGCG ACGCGCTGTC TTCCAAGCAC
GTGTGGACGC TCAGCTTCGA TCCCGAGCGC TACCTGCCGC TGCTGGCCTC GCTGCAGTTC
AACTACGCGC CCTGGGTGCA CGCGCATCTC ACCCGCGAGG CGCAGGGCGG CACCATCGCG
TCGATTCGCT CGAGCACGCT GCGCAGCACG CTGTTGCCGG TGCCGCCGCT GGCCGAGCAG
CGCGCGATCG CCGAGGTGCT GGCGCGCACC CGCGGGCGCA TGGCGGCCGA GCGGCGACTG
CGCAGCGTGC GCCGGCGGCT GCGCGACGCA CTGCGCGAAG ATCTGATGAC CGGGCGCGTG
CGCGCTCGCC CGGGGTAG
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| Protein sequence | MSADDGADAL EFDSGYALGE LLDDLGPWSG KPGAALPEGW RWSSLGALAT GKARYGVNLP
ARPYDAGLPR FVRITDIGDD GRLRDDAPVS LSDPGAADYR LKPGDLAVAR SGATVGKSYL
YRPEDGVCVP AGYLLCVPLA PSRCEPAFVA QWAQSRGYRA WLRSAVRTAA QPNVNASELA
TLPVPVPPLE EQREVARVLA LGDALLAHSG RIIDKLGLVL AALVRDLLSR GIGEDGRIRD
PARHPELFRE TPLGLLPRAW SVSEAGELLA ALKPAMRSGP FGSELRKSDL VAEGVPLLGI
DNVDTDAFVP RYRRFVPPHL FQALGRYAVR PGDVMVTVMG TVGRSCVVPD DIGDALSSKH
VWTLSFDPER YLPLLASLQF NYAPWVHAHL TREAQGGTIA SIRSSTLRST LLPVPPLAEQ
RAIAEVLART RGRMAAERRL RSVRRRLRDA LREDLMTGRV RARPG
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