| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5001 |
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| Symbol | |
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| ID | 8547411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 6896967 |
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| End bp | 6897737 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646389677 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003269383 |
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| Protein GI | 262198174 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.46394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCG AACTCACAGG AAAACGCGCG CTGGTGAGCG GCGGCAGCCG CGGTATCGGG
CGCAGCATCG CGCTGGCGCT GGCCGCCGAG GGCTGTCGCG TAGCCGTGAT CGCGCGCGGG
CGCGAAGGTC TCGACGCGGT CTCGCCCGAG CTGGTCGCGG CAGGCGGCAG CGAGCACACC
ACCATCGCGG CCGACGTCAC CACGGCCGAG GGCGCCGCGC ACGCGCTCGA CGCCGCGGTC
GAAGCCTTTG GCGGTCTCGA CATCGTCATC GCCAACGTCG GCAAGTCGGG CGCGCGTCAC
TGCCGCGACA TGGACGACGA GGACTTTGCG TTCTCGCTCG ACATGAACCT GTGGAGCGGC
ATGCGCGTGT GTCAGCGCGC CGTGCCCGCG CTGCGCGAGA GCGGCGGCGG CGCCATGGTG
TTCATCGCCT CGGTGTGGGG CCGCGAGGCC GGCGGCGCGC CCGGCTACAA CGTCGGCAAG
GCCGGCGTCA TCAGCCTGGC CAAGGCCATG GCCCGCGACT ACGCGGCCGA CAACATCCGC
GTCAACAGCG TGGCGCCCGG GTCGATCCTG TTCCCGGGTG GCGGCTGGGA TCGCCGGCAG
AAGGACAACC CCGAGGGCAT CGCGGCCTTT GTCGAGCGCG AGCTGCCCTT TGGTCGCTTC
GGTCGCCCCG AGGAAGTCGC CGACGTGGTC AGCTTCCTGT GCTCGGAGCG CGCGCGGTGG
ATCTCGGGCG CCTGCATCGC CGTGGACGGC GCGCAGGGCC GGGGCTTCTG A
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| Protein sequence | MDLELTGKRA LVSGGSRGIG RSIALALAAE GCRVAVIARG REGLDAVSPE LVAAGGSEHT
TIAADVTTAE GAAHALDAAV EAFGGLDIVI ANVGKSGARH CRDMDDEDFA FSLDMNLWSG
MRVCQRAVPA LRESGGGAMV FIASVWGREA GGAPGYNVGK AGVISLAKAM ARDYAADNIR
VNSVAPGSIL FPGGGWDRRQ KDNPEGIAAF VERELPFGRF GRPEEVADVV SFLCSERARW
ISGACIAVDG AQGRGF
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