Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_4987 |
Symbol | |
ID | 8547395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 6874511 |
End bp | 6876985 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646389661 |
Product | ATP-dependent protease La |
Protein accession | YP_003269369 |
Protein GI | 262198160 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00166311 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.674678 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTTCA AGAACGACAA AGATGAATCT GACGAGGGCA CGCCCACGCG TAGCCTTCCC CTTTTGCCGC TGCGCGACAT CATCGTTTTT CCGCACATGG TCGTGCCTCT GTTCGTGGGC AGGGAAAAGT CCATCAACGC CCTCGAGGAG GCGATGGAGG CCGATAAGGA GCTGCTGCTC GCGGCTCAGA AGAAGGCCAA GACCAACGAT CCGCGCGAGG ACGACATCTT CAGCGTCGGC ACCGTGGGTC ACATCATCCA GCTCCTGCGC CTGCCCGACG GCACGGTCAA GGTGCTGGTC GAGGGCAAGC AGCGGGCCCG CATCCTGGGC TACGAGCAGA CCTCGCCCTT CTTCCTGGCC GAGGTCCAGG AGATCGCGGA GCCCGACGAG CGCACCGTGG AGATGCAGGC GCTGATGCGC TCGATCCAGA CGGTGTTCGA GAACTACGTC AAGCTCAACA AGCGCATCCC GCCCGAGTTC CTGGTCAGCG TGCAGACCAT CGAGGACCCG GCCCGGCTGG CCGACACCAT CGTCGCCCAG GTGTCGCTCA AGCTCAAAGA CAAGCAGGAG ATCCTCGAGA CGGTGTCTCC GGCCAAGCGC CTCGAGCGCC TGTACGAGCT GATGCAGGCC GAGATCGAGA TTCTCCAGGT CGAGAAGAAG ATCCGCACGC GGGTCAAGAA GCAGATGGAG AAGTCGCAGA AGGAGTACTA CCTGAATGAG CAGATGCAGG CGATTCAGAA GGAGCTCGGC GACCGTGACG AATTCAAAAA CGAATTGAAC GACCTGGAAC AGAAGATCAA GCAGAAGCGC ATGAGCCTCG AGGCCCGCGA GCGCTGCCTC AAAGAGTTCA AGAAGCTCAA GATGATGTCG CCGATGAGCG CCGAGGCGAC GGTGGTGCGC AACTACATCG ACTGGGTGCT GGCGCTGCCG TGGGACGAGA AGTCCGACGA CCGCACCGAC ATCATCGAGG CCGAGAAGAT CCTCGAGGCC GACCACTACG GTCTCAACAA GGTCAAGGAG CGCATCCTCG AGTACCTGGC GGTGCAGACG CTGGTCGACC GCCTCAAGGG GCCGATCATC TGCCTGGTCG GCCCTCCCGG CGTGGGCAAG ACCTCGCTGG CGCGCTCGAT CGCGCGCGCC ACGGGCCGCA AGTTCGTGCG CCAGTCGCTC GGCGGCGTGC GCGACGAGGC CGAGATCCGC GGCCACCGGC GCACCTATAT CGGCGCGCTG CCGGGCAAGG TCCTGCAGTC GCTCAAGAAG GTCGGGACCA ACAACCCGGT GTTCCTGCTC GACGAGATCG ACAAGATGTC CCAGGACTTC CGCGGCGACC CGGCCTCGGC GCTGCTCGAG GTGCTCGACC CCGAGCAAAA CGATACCTTC AACGATCACT ATCTCGATCT GGATTACGAC CTGAGTGATG TCATGTTCAT CACCACGGCC AACACCTGGC ACCAGATCCC GCTGCCGCTG CAGGATCGCC TCGAGATCAT CGAGCTGCCC GGTTATACCG AGTGGGAAAA GATCGCCATC TCGAATCAGT ATCTGATTCC CAAGCAGCGC GAGGCCAACG GCATCCAGGA CCTCGAGGTC AACTTCACCG AGGAGTCGCT GCAGACGATC ATCCACCGCT ACACCAAAGA GGCCGGTGTG CGTAACCTCG AGCGCGAGCT GGCCACCTGC TGCCGCAAGC TGGCCAAGGA CTGGCTCACG CACAAGAAGC CCAAGAAGAA GGCCTACGAG GTCACGCCCG AGCTCTTGCA GAGCTATCTC GGGGTCGAGA AGTTCCGCGC CAACAAGCGC GAAGAGGCCA ACGACATCGG CCTGGCCAAC GGCCTGGCGG TCACCTCGCA CGGCGGCGAT CTGCTGCCGG CCGAGGTCGC CGTCATGCCC GGCAAGGGCA AGCTCACGCT CACCGGCAAG CTCGGCGACG TGATGCAGGA GTCGGCCCAG GCGGCCATGA GCTACATCCG CTCGCGGGCC CTGAGCCTCG GCCTCACCCA CGACTTCCAG ACCAAGATCG ACGGCCACGT GCACTTCCCC GAGGGCGCGA TCCCCAAGGA CGGCCCCTCG GCCGGTATCA CCATGGCCAC GGCCATCGCC TCGGCCCTGC TGCGCATCCC GGTGCGCCAG GATCTGGCCA TGACCGGCGA GATCACGCTG CGCGGCCGCG TGCTGCCCGT GGGCGGCATC AAGGAGAAGA TCCTGGCCGC ACACCGCGCC GAGATCCTCG AGGTGCTGAT CCCGCACGAG AACGAGAAAG ACCTCAAGGA TATCCCCGAG AAGGTCATGG AGCAGATGAC CATCCACCCG GTGCGGCACA TGGACGAGGT GCTCAAGCTG GCGCTGGCGC ACGACGATCC CGACAGCTTC CTGGTGGAGC CCACCGAGGT CATCGACTGG CGCCTGAGCG GCGGCAACGA CGACTCGACG ACGCCGCCCA AGGGCACGGT GGTCGACCGT CAATCGGCTC ATTGA
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Protein sequence | MFFKNDKDES DEGTPTRSLP LLPLRDIIVF PHMVVPLFVG REKSINALEE AMEADKELLL AAQKKAKTND PREDDIFSVG TVGHIIQLLR LPDGTVKVLV EGKQRARILG YEQTSPFFLA EVQEIAEPDE RTVEMQALMR SIQTVFENYV KLNKRIPPEF LVSVQTIEDP ARLADTIVAQ VSLKLKDKQE ILETVSPAKR LERLYELMQA EIEILQVEKK IRTRVKKQME KSQKEYYLNE QMQAIQKELG DRDEFKNELN DLEQKIKQKR MSLEARERCL KEFKKLKMMS PMSAEATVVR NYIDWVLALP WDEKSDDRTD IIEAEKILEA DHYGLNKVKE RILEYLAVQT LVDRLKGPII CLVGPPGVGK TSLARSIARA TGRKFVRQSL GGVRDEAEIR GHRRTYIGAL PGKVLQSLKK VGTNNPVFLL DEIDKMSQDF RGDPASALLE VLDPEQNDTF NDHYLDLDYD LSDVMFITTA NTWHQIPLPL QDRLEIIELP GYTEWEKIAI SNQYLIPKQR EANGIQDLEV NFTEESLQTI IHRYTKEAGV RNLERELATC CRKLAKDWLT HKKPKKKAYE VTPELLQSYL GVEKFRANKR EEANDIGLAN GLAVTSHGGD LLPAEVAVMP GKGKLTLTGK LGDVMQESAQ AAMSYIRSRA LSLGLTHDFQ TKIDGHVHFP EGAIPKDGPS AGITMATAIA SALLRIPVRQ DLAMTGEITL RGRVLPVGGI KEKILAAHRA EILEVLIPHE NEKDLKDIPE KVMEQMTIHP VRHMDEVLKL ALAHDDPDSF LVEPTEVIDW RLSGGNDDST TPPKGTVVDR QSAH
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