Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_4968 |
Symbol | |
ID | 8547376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 6849212 |
End bp | 6850426 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646389642 |
Product | aminotransferase class I and II |
Protein accession | YP_003269350 |
Protein GI | 262198141 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.121403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAA CCCTTCGTCT CTCCTCCCGA CTCGACGCCG TCAAGCCCTC GATCACCATG GCGGTGACCG CCCAGGCGCA GGAACTGCGC GCCCAGGGCA TCGACGTCAT CGGCTTCGGC GCCGGCGAGC CCGATTTCGC CACGCCCTCG CACATCCGCG CCGCGGTCAA GGAGGCGCTC GACCGCGACG CCTCGACCAT CGGCAAGTAC ACGCCCGCGC CCGGTCTGCC GGCGCTGCGC GCGGCGGTGG CCAACGAGCT GAGCGAGGTG CACGGCGGCG CCTACACGCC GGCGCAGGTG ATCGTCACCT GCGGCGCCAA GCACGCGCTC TACGAGCTGT TTCAGGCCAT GCTCGACCCG GGCGACGAGG TCATCGTGCC GGCCCCGTAC TGGGTGTCGT ATCCCGACAT GGTCCGGCTC GCGGGCGGCA CGCCCGTGGT CGTCGACACC CGCGCCGACG AGCGCTTCCT CATGGCCGCC GAGGATCTGC GCGCCGCGAT CACGCCGCGC ACGCGCGCCA TCCTCCTCAA CACGCCGAGC AACCCCACGG GTGCGGTCTA CGATCGCGCC CGCCTCGAGG CGCTGGCCGC GGTGGTGCTC GAACACGATC TCTTCGTCAT CTCGGACGAC ATCTACCGCC ACCTGGTCTA CGACGGTCAC TACGAGTCCA TCGCCGGGCT GTCGCCGGAA GTCGCCGCGC GCACCGTCTT GATCGACGGC GTGTCCAAGA GCTACGCCAT GACCGGCTGG CGCATCGGCT ACGCGCTCGG CCCGCTGCCG CTGATTCAGG CCATGGGCAA GATCCAGAGC CAGCTCACCT CGGGCGCCTC GCACGTCGCC CAGGTGGCGG CCCTGGCCGC GCTCACCGGT CCCCAGGCGT GCATCGCCGA TATGCGCGTG GCCTTTGACG GGCGCCGTCG CGAGATGCAC AGACGCCTGT CCGAAATCCC CGGTGTCCGC TGCGTGGAGC CGGAGGGCGC GTTCTACTGC TTCCCCGACA TCTCCTCGTA TATCGGCAAG CAGACCGTGG AGGGCACGGT GCTGCCCAAC GACGTCGCCC TGTGCGCGTA CCTGGTGCGC GAGGGCAAGG TGGCCATCGT GCCCGGCTCG GGCTTTGGCG CGCCCGGCTA CGCCCGGCTG TCGTACGCGT GCAGCATGGA CGATATCCGC ACCGGCGTGA CGCGCATGGC CGAAGCGCTG TCCAAGCTGT CCTGA
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Protein sequence | MSATLRLSSR LDAVKPSITM AVTAQAQELR AQGIDVIGFG AGEPDFATPS HIRAAVKEAL DRDASTIGKY TPAPGLPALR AAVANELSEV HGGAYTPAQV IVTCGAKHAL YELFQAMLDP GDEVIVPAPY WVSYPDMVRL AGGTPVVVDT RADERFLMAA EDLRAAITPR TRAILLNTPS NPTGAVYDRA RLEALAAVVL EHDLFVISDD IYRHLVYDGH YESIAGLSPE VAARTVLIDG VSKSYAMTGW RIGYALGPLP LIQAMGKIQS QLTSGASHVA QVAALAALTG PQACIADMRV AFDGRRREMH RRLSEIPGVR CVEPEGAFYC FPDISSYIGK QTVEGTVLPN DVALCAYLVR EGKVAIVPGS GFGAPGYARL SYACSMDDIR TGVTRMAEAL SKLS
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