| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4956 |
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| Symbol | |
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| ID | 8547364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6832048 |
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| End bp | 6833094 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646389630 |
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| Product | GTP-binding protein YchF |
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| Protein accession | YP_003269338 |
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| Protein GI | 262198129 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.44477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.950865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG GTCTCGTCGG CATGCCCGGA GCGGGCAAGA GCACGGTGTT TGGCGCGTTG
ACCGGCCTCT CGGTCGAGAC GGGCTTTGGC GCGAGCGCCA GCAAGCAGAA CATCGGAACC
GTGAAAGTCC CAGACGAGCG CGTAGACGCG CTCGCCAAGC TGTACACCCC CAAGAAGACC
ACCTACGCCG AGTGCGTCTT CACCGACGTG GGCGGCGGTG GCAACCAGGG CTCGGCGAGC
ATCGACCGGG CCACGCTCAA CGCCATGCGC GAGGTCGACG CCCTGTGCCA GGTGGTGCGC
GCGTTCCCGG ACGCGACCGG CAAGGCGGCC GATCCCGCGG ACGAGATCGT CGAACTCGAG
ACCGAGTGCA TCCTGGCCGA TCTCGACCTG GTCGAGCGCC GCGTGCAGCG CCTGACCAAG
GACCGCTCGA ACCCGCGCGA GCTGGCCTTG CTCGAGCGCG TGCAGGCGCA CCTCGAGGCC
GAGAAGCCGG TGCGCGGCTT CGAGCTCGAC GACACCGAGA TCAAGCTGCT CTCGGGCTAT
CGCCTGCTCA GCCAGAAGCC GCTGCTGCTG GTGCTCAACG TCACCGAGGA CGAGGCCAGC
GGCGAGCCGC CGGCCGAGAT CGCCAAGGCG GCCAGCGACC GCGGCCTGGG CCTGGTGGTG
CTGTCGGCGC AGATCGAGAT GGACATCGCC CAGATGCCCG AGGACGAGCA GCCCGATTTC
CTGGCCTCCA TGGGCCTGGA GGCGCCGGCC AAGAACCGCT TCGTGCGCGC GGCCTACGAG
CTCATCGACC TGGTGAGCAT GCTGACCGCG GGCCCGGACG AGTGCCGCGC CTGGCCGATT
CCGCGCGGCA GCAAAGCCCC GCGCGCGGCC GGCAAGATCC ACTCGGACAT CGAGCGCGGC
TTCATCCGCG CCGAGGTCGT GCCCTGGCAG GACCTGGTGG CGCTGGGCTC GGAGGCCAAG
TGCCGCGACG CCGGCAAGCT GCGCGTCGAG GGCAAGGAGT ACATCATGCA GGACGGCGAC
GTCGTGCACT TCCGCTTCAA CGTCTGA
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| Protein sequence | MKIGLVGMPG AGKSTVFGAL TGLSVETGFG ASASKQNIGT VKVPDERVDA LAKLYTPKKT
TYAECVFTDV GGGGNQGSAS IDRATLNAMR EVDALCQVVR AFPDATGKAA DPADEIVELE
TECILADLDL VERRVQRLTK DRSNPRELAL LERVQAHLEA EKPVRGFELD DTEIKLLSGY
RLLSQKPLLL VLNVTEDEAS GEPPAEIAKA ASDRGLGLVV LSAQIEMDIA QMPEDEQPDF
LASMGLEAPA KNRFVRAAYE LIDLVSMLTA GPDECRAWPI PRGSKAPRAA GKIHSDIERG
FIRAEVVPWQ DLVALGSEAK CRDAGKLRVE GKEYIMQDGD VVHFRFNV
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